Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
USP45Q70EL2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.52■□□□□ 0.4
USP45Q70EL2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
USP45Q70EL2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
USP45Q70EL2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.52■□□□□ 0.39
USP45Q70EL2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.52■□□□□ 0.39
USP45Q70EL2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.51■□□□□ 0.39
USP45Q70EL2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.51■□□□□ 0.39
USP45Q70EL2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
USP45Q70EL2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.51■□□□□ 0.39
USP45Q70EL2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
USP45Q70EL2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.51■□□□□ 0.39
USP45Q70EL2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.51■□□□□ 0.39
USP45Q70EL2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.51■□□□□ 0.39
USP45Q70EL2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.51■□□□□ 0.39
USP45Q70EL2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 LYSMD4-203ENST00000378904 2122 ntBASIC17.51■□□□□ 0.39
USP45Q70EL2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.51■□□□□ 0.39
USP45Q70EL2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.51■□□□□ 0.39
USP45Q70EL2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP45Q70EL2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
USP45Q70EL2 AC148477.5-201ENST00000625164 1645 ntBASIC17.5■□□□□ 0.39
USP45Q70EL2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.5■□□□□ 0.39
USP45Q70EL2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
USP45Q70EL2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.5■□□□□ 0.39
USP45Q70EL2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.5■□□□□ 0.39
USP45Q70EL2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 KRT18P67-201ENST00000432816 1264 ntBASIC17.5■□□□□ 0.39
USP45Q70EL2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.5■□□□□ 0.39
USP45Q70EL2 PRYP5-201ENST00000451909 266 ntBASIC17.5■□□□□ 0.39
USP45Q70EL2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
USP45Q70EL2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
USP45Q70EL2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.5■□□□□ 0.39
USP45Q70EL2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.5■□□□□ 0.39
USP45Q70EL2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
USP45Q70EL2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.5■□□□□ 0.39
USP45Q70EL2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
USP45Q70EL2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP45Q70EL2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.49■□□□□ 0.39
USP45Q70EL2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
USP45Q70EL2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.49■□□□□ 0.39
USP45Q70EL2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.49■□□□□ 0.39
USP45Q70EL2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
USP45Q70EL2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.49■□□□□ 0.39
USP45Q70EL2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.49■□□□□ 0.39
USP45Q70EL2 AC021087.4-201ENST00000563761 564 ntBASIC17.49■□□□□ 0.39
USP45Q70EL2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
USP45Q70EL2 MTDHP4-201ENST00000600287 670 ntBASIC17.49■□□□□ 0.39
USP45Q70EL2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.49■□□□□ 0.39
USP45Q70EL2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
USP45Q70EL2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.49■□□□□ 0.39
USP45Q70EL2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP45Q70EL2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms