Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 PMS2P2-201ENST00000425039 1128 ntBASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 VN2R19P-201ENST00000442399 1052 ntBASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 AC108073.2-201ENST00000464002 357 ntBASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 AL355385.1-201ENST00000606123 409 ntBASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 AL139327.4-201ENST00000612362 153 ntBASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 AC046185.3-201ENST00000623228 1824 ntBASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 AP002414.1-201ENST00000391405 1147 ntBASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 KRT18P2-201ENST00000447938 1258 ntBASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 GGTLC5P-201ENST00000617623 998 ntBASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 AC004790.2-201ENST00000623588 572 ntBASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
DCLRE1AQ6PJP8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 RPSAP43-201ENST00000402237 625 ntBASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 RPS8P6-201ENST00000426177 609 ntBASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 MIR3687-2-201ENST00000577708 61 ntBASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 AP001160.2-201ENST00000596071 487 ntBASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 MIR3687-1-201ENST00000614492 61 ntBASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DCLRE1AQ6PJP8 AC006116.8-202ENST00000587620 1550 ntBASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.59■□□□□ 0.57
DCLRE1AQ6PJP8 AC004832.2-201ENST00000426397 482 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms