Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDCP2Q5VXM1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCP2Q5VXM1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCP2Q5VXM1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 AC129492.6-201ENST00000611383 1305 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 AL355306.1-201ENST00000415580 579 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 TIMM8BP1-201ENST00000452384 211 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 AC067863.1-201ENST00000494933 530 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 FAM86C2P-203ENST00000528684 1004 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 AC138761.1-201ENST00000584393 385 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 AL390955.2-201ENST00000603032 514 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 AC099522.2-201ENST00000607001 744 ntBASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCP2Q5VXM1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 MIR4745-201ENST00000577608 62 ntBASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 AC135776.1-201ENST00000319817 2481 ntBASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCP2Q5VXM1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 AL135999.2-201ENST00000622438 1686 ntBASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 AL671277.1-201ENST00000429656 993 ntBASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 AC140658.5-201ENST00000438532 169 ntBASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 AC087163.2-201ENST00000457299 853 ntBASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 AJ011932.1-201ENST00000621707 465 ntBASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCP2Q5VXM1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms