Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 AC008267.7-201ENST00000624570 1194 ntBASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AC245100.3-201ENST00000441281 285 ntBASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AC009477.1-201ENST00000452936 217 ntBASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 AC073592.3-201ENST00000625118 1834 ntBASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC28.17■■■□□ 2.1
SNAPC4Q5SXM2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC28.16■■■□□ 2.1
SNAPC4Q5SXM2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 AC027369.6-201ENST00000525520 931 ntBASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 TP53TG3HP-202ENST00000569755 579 ntBASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 AL138828.2-201ENST00000615812 383 ntBASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 MIR346-201ENST00000362234 95 ntBASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 GIMAP3P-201ENST00000495150 836 ntBASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 AC140912.1-201ENST00000577171 1054 ntBASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 MIR6799-201ENST00000620297 69 ntBASIC28.15■■■□□ 2.1
SNAPC4Q5SXM2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
SNAPC4Q5SXM2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
SNAPC4Q5SXM2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC28.14■■■□□ 2.1
SNAPC4Q5SXM2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SNAPC4Q5SXM2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
SNAPC4Q5SXM2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SNAPC4Q5SXM2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SNAPC4Q5SXM2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SNAPC4Q5SXM2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SNAPC4Q5SXM2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 AC005412.3-201ENST00000580309 715 ntBASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms