Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL135999.2-201ENST00000622438 1686 ntBASIC18.46■□□□□ 0.55
VARS2Q5ST30 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.46■□□□□ 0.55
VARS2Q5ST30 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARS2Q5ST30 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VARS2Q5ST30 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
VARS2Q5ST30 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 MRPL20P1-201ENST00000400819 433 ntBASIC18.45■□□□□ 0.54
VARS2Q5ST30 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 AC018845.2-201ENST00000568326 409 ntBASIC18.45■□□□□ 0.54
VARS2Q5ST30 MIR3687-2-201ENST00000577708 61 ntBASIC18.45■□□□□ 0.54
VARS2Q5ST30 AL139327.4-201ENST00000612362 153 ntBASIC18.45■□□□□ 0.54
VARS2Q5ST30 MIR3687-1-201ENST00000614492 61 ntBASIC18.45■□□□□ 0.54
VARS2Q5ST30 AC010654.1-201ENST00000615722 808 ntBASIC18.45■□□□□ 0.54
VARS2Q5ST30 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.45■□□□□ 0.54
VARS2Q5ST30 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARS2Q5ST30 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARS2Q5ST30 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARS2Q5ST30 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 GGTLC5P-201ENST00000617623 998 ntBASIC18.44■□□□□ 0.54
VARS2Q5ST30 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARS2Q5ST30 NEFHP1-201ENST00000412845 2629 ntBASIC18.44■□□□□ 0.54
VARS2Q5ST30 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARS2Q5ST30 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARS2Q5ST30 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARS2Q5ST30 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VARS2Q5ST30 AL590787.1-201ENST00000568856 1315 ntBASIC18.44■□□□□ 0.54
VARS2Q5ST30 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VARS2Q5ST30 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.44■□□□□ 0.54
VARS2Q5ST30 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 AC006116.8-202ENST00000587620 1550 ntBASIC18.43■□□□□ 0.54
VARS2Q5ST30 AC012317.2-201ENST00000623305 2251 ntBASIC18.43■□□□□ 0.54
VARS2Q5ST30 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.43■□□□□ 0.54
VARS2Q5ST30 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARS2Q5ST30 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms