Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 AC046185.3-201ENST00000623228 1824 ntBASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.68■□□□□ 0.1
RNFT1Q5M7Z0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 ACTG1P4-201ENST00000425123 1122 ntBASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 AC010507.1-201ENST00000633895 436 ntBASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
RNFT1Q5M7Z0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 PI4KAP1-204ENST00000612579 1703 ntBASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 AC211486.1-202ENST00000416371 468 ntBASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 DNAJB3-202ENST00000449667 1266 ntBASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 AC211476.1-201ENST00000503899 468 ntBASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 AC005829.1-201ENST00000570002 483 ntBASIC15.66■□□□□ 0.1
RNFT1Q5M7Z0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms