Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 POLD2P1-201ENST00000511220 997 ntBASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AC105339.3-201ENST00000560043 636 ntBASIC15.32■□□□□ 0.04
FREM1Q5H8C1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.32■□□□□ 0.04
FREM1Q5H8C1 AL590787.1-201ENST00000568856 1315 ntBASIC15.31■□□□□ 0.04
FREM1Q5H8C1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 AL135999.2-201ENST00000622438 1686 ntBASIC15.31■□□□□ 0.04
FREM1Q5H8C1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 SLC25A1P3-201ENST00000395415 828 ntBASIC15.31■□□□□ 0.04
FREM1Q5H8C1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 STK25P1-201ENST00000585406 838 ntBASIC15.31■□□□□ 0.04
FREM1Q5H8C1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 AC003669.1-201ENST00000334569 611 ntBASIC15.31■□□□□ 0.04
FREM1Q5H8C1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 AC108073.2-201ENST00000464002 357 ntBASIC15.31■□□□□ 0.04
FREM1Q5H8C1 AC092910.1-201ENST00000482027 1129 ntBASIC15.31■□□□□ 0.04
FREM1Q5H8C1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FREM1Q5H8C1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 MYCLP1-201ENST00000372451 1075 ntBASIC15.3■□□□□ 0.04
FREM1Q5H8C1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 AC027601.4-201ENST00000611259 610 ntBASIC15.3■□□□□ 0.04
FREM1Q5H8C1 AC006538.3-201ENST00000612495 578 ntBASIC15.3■□□□□ 0.04
FREM1Q5H8C1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FREM1Q5H8C1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms