Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 SLC25A1P1-201ENST00000528351 927 ntBASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC4Q5GLZ8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 AC141586.5-201ENST00000624546 2050 ntBASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 AC139713.2-201ENST00000641328 2723 ntBASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 AKR1C7P-201ENST00000305623 895 ntBASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 AC122714.2-201ENST00000502787 707 ntBASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 TP73-AS1-210ENST00000637775 1455 ntBASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC4Q5GLZ8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC4Q5GLZ8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC4Q5GLZ8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC4Q5GLZ8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC4Q5GLZ8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HERC4Q5GLZ8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC4Q5GLZ8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC4Q5GLZ8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC4Q5GLZ8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 SAPCD2P3-201ENST00000455031 850 ntBASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 PKD1P1-201ENST00000458669 6805 ntBASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC4Q5GLZ8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.5■□□□□ 0.71
HERC4Q5GLZ8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC4Q5GLZ8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HERC4Q5GLZ8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC4Q5GLZ8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms