Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCBP1Q09161 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCBP1Q09161 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCBP1Q09161 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NCBP1Q09161 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCBP1Q09161 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NCBP1Q09161 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.82■□□□□ 0.76
NCBP1Q09161 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NCBP1Q09161 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NCBP1Q09161 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.82■□□□□ 0.76
NCBP1Q09161 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.82■□□□□ 0.76
NCBP1Q09161 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCBP1Q09161 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 AL121761.2-201ENST00000598007 1648 ntBASIC19.82■□□□□ 0.76
NCBP1Q09161 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCBP1Q09161 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.82■□□□□ 0.76
NCBP1Q09161 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCBP1Q09161 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NCBP1Q09161 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 AL023806.1-201ENST00000603994 1649 ntBASIC19.81■□□□□ 0.76
NCBP1Q09161 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 TSPY19P-201ENST00000418461 509 ntBASIC19.81■□□□□ 0.76
NCBP1Q09161 TSPY18P-201ENST00000441642 509 ntBASIC19.81■□□□□ 0.76
NCBP1Q09161 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.81■□□□□ 0.76
NCBP1Q09161 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.81■□□□□ 0.76
NCBP1Q09161 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.81■□□□□ 0.76
NCBP1Q09161 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.81■□□□□ 0.76
NCBP1Q09161 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.81■□□□□ 0.76
NCBP1Q09161 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.81■□□□□ 0.76
NCBP1Q09161 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.81■□□□□ 0.76
NCBP1Q09161 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NCBP1Q09161 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.81■□□□□ 0.76
NCBP1Q09161 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
NCBP1Q09161 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCBP1Q09161 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NCBP1Q09161 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.8■□□□□ 0.76
NCBP1Q09161 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NCBP1Q09161 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.8■□□□□ 0.76
NCBP1Q09161 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 AC004870.1-201ENST00000315132 882 ntBASIC19.8■□□□□ 0.76
NCBP1Q09161 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.8■□□□□ 0.76
NCBP1Q09161 IGHV3-47-201ENST00000425060 335 ntBASIC19.8■□□□□ 0.76
NCBP1Q09161 KRT18P65-201ENST00000439811 1286 ntBASIC19.8■□□□□ 0.76
NCBP1Q09161 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.8■□□□□ 0.76
NCBP1Q09161 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.8■□□□□ 0.76
NCBP1Q09161 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.8■□□□□ 0.76
NCBP1Q09161 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.8■□□□□ 0.76
NCBP1Q09161 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NCBP1Q09161 NSUN5P1-202ENST00000421140 1535 ntBASIC19.8■□□□□ 0.76
NCBP1Q09161 NSUN5P2-203ENST00000457352 1529 ntBASIC19.8■□□□□ 0.76
NCBP1Q09161 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NCBP1Q09161 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCBP1Q09161 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms