Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDR2Q01850 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.63■□□□□ 0.57
CDR2Q01850 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDR2Q01850 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDR2Q01850 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.62■□□□□ 0.57
CDR2Q01850 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDR2Q01850 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.62■□□□□ 0.57
CDR2Q01850 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.62■□□□□ 0.57
CDR2Q01850 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.62■□□□□ 0.57
CDR2Q01850 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.62■□□□□ 0.57
CDR2Q01850 TOB2P1-201ENST00000469761 992 ntBASIC18.62■□□□□ 0.57
CDR2Q01850 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.62■□□□□ 0.57
CDR2Q01850 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.62■□□□□ 0.57
CDR2Q01850 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.62■□□□□ 0.57
CDR2Q01850 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CDR2Q01850 STK25P1-201ENST00000585406 838 ntBASIC18.62■□□□□ 0.57
CDR2Q01850 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.62■□□□□ 0.57
CDR2Q01850 AL358472.4-201ENST00000633140 710 ntBASIC18.62■□□□□ 0.57
CDR2Q01850 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CDR2Q01850 AL353593.2-201ENST00000602529 1483 ntBASIC18.62■□□□□ 0.57
CDR2Q01850 TP73-AS1-210ENST00000637775 1455 ntBASIC18.62■□□□□ 0.57
CDR2Q01850 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CDR2Q01850 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 AC046185.3-201ENST00000623228 1824 ntBASIC18.62■□□□□ 0.57
CDR2Q01850 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDR2Q01850 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CDR2Q01850 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDR2Q01850 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 AC099398.1-201ENST00000567919 2776 ntBASIC18.61■□□□□ 0.57
CDR2Q01850 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDR2Q01850 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDR2Q01850 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.61■□□□□ 0.57
CDR2Q01850 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.61■□□□□ 0.57
CDR2Q01850 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDR2Q01850 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.61■□□□□ 0.57
CDR2Q01850 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 KRT17P6-201ENST00000453795 1220 ntBASIC18.61■□□□□ 0.57
CDR2Q01850 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.61■□□□□ 0.57
CDR2Q01850 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.61■□□□□ 0.57
CDR2Q01850 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.61■□□□□ 0.57
CDR2Q01850 MIR3180-1-201ENST00000580374 94 ntBASIC18.61■□□□□ 0.57
CDR2Q01850 MIR3180-3-201ENST00000584616 94 ntBASIC18.61■□□□□ 0.57
CDR2Q01850 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.61■□□□□ 0.57
CDR2Q01850 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.61■□□□□ 0.57
CDR2Q01850 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDR2Q01850 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CDR2Q01850 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDR2Q01850 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 AC022211.2-201ENST00000585075 2527 ntBASIC18.6■□□□□ 0.57
CDR2Q01850 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.6■□□□□ 0.57
CDR2Q01850 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.6■□□□□ 0.57
CDR2Q01850 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 SLC25A1P3-201ENST00000395415 828 ntBASIC18.6■□□□□ 0.57
CDR2Q01850 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 IGHV3-47-201ENST00000425060 335 ntBASIC18.6■□□□□ 0.57
CDR2Q01850 LINC00265-3P-201ENST00000447588 903 ntBASIC18.6■□□□□ 0.57
CDR2Q01850 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.6■□□□□ 0.57
CDR2Q01850 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CDR2Q01850 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.6■□□□□ 0.57
CDR2Q01850 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDR2Q01850 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDR2Q01850 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms