Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEP78395 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRAMEP78395 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRAMEP78395 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRAMEP78395 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEP78395 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRAMEP78395 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEP78395 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PRAMEP78395 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PRAMEP78395 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PRAMEP78395 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PRAMEP78395 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PRAMEP78395 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEP78395 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.63■□□□□ 0.41
PRAMEP78395 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEP78395 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEP78395 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 AC005336.2-201ENST00000593183 939 ntBASIC17.63■□□□□ 0.41
PRAMEP78395 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEP78395 AL138831.2-201ENST00000606564 490 ntBASIC17.63■□□□□ 0.41
PRAMEP78395 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEP78395 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PRAMEP78395 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 AC108860.2-201ENST00000562760 2183 ntBASIC17.63■□□□□ 0.41
PRAMEP78395 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
PRAMEP78395 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEP78395 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEP78395 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEP78395 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEP78395 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.62■□□□□ 0.41
PRAMEP78395 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEP78395 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 AC002558.1-201ENST00000488906 803 ntBASIC17.62■□□□□ 0.41
PRAMEP78395 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.62■□□□□ 0.41
PRAMEP78395 KRT18P35-201ENST00000510488 1269 ntBASIC17.62■□□□□ 0.41
PRAMEP78395 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.62■□□□□ 0.41
PRAMEP78395 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEP78395 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.62■□□□□ 0.41
PRAMEP78395 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PRAMEP78395 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.62■□□□□ 0.41
PRAMEP78395 AP000550.4-202ENST00000639755 178 ntBASIC17.62■□□□□ 0.41
PRAMEP78395 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PRAMEP78395 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEP78395 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEP78395 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 TNRC18P3-201ENST00000441896 2691 ntBASIC17.62■□□□□ 0.41
PRAMEP78395 LYSMD4-203ENST00000378904 2122 ntBASIC17.62■□□□□ 0.41
PRAMEP78395 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEP78395 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms