Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SKP1P63208 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.61■□□□□ 0.25
SKP1P63208 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.61■□□□□ 0.25
SKP1P63208 SIGLEC30P-201ENST00000455569 941 ntBASIC16.61■□□□□ 0.25
SKP1P63208 MTDHP3-201ENST00000594186 672 ntBASIC16.61■□□□□ 0.25
SKP1P63208 AP001269.4-201ENST00000609611 512 ntBASIC16.61■□□□□ 0.25
SKP1P63208 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.61■□□□□ 0.25
SKP1P63208 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.61■□□□□ 0.25
SKP1P63208 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.61■□□□□ 0.25
SKP1P63208 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.61■□□□□ 0.25
SKP1P63208 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.61■□□□□ 0.25
SKP1P63208 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.61■□□□□ 0.25
SKP1P63208 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.61■□□□□ 0.25
SKP1P63208 SIGLEC16-201ENST00000599858 1437 ntBASIC16.61■□□□□ 0.25
SKP1P63208 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.61■□□□□ 0.25
SKP1P63208 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SKP1P63208 REXO1L11P-201ENST00000620964 1927 ntBASIC16.6■□□□□ 0.25
SKP1P63208 AL356309.3-201ENST00000624132 1934 ntBASIC16.6■□□□□ 0.25
SKP1P63208 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.6■□□□□ 0.25
SKP1P63208 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SKP1P63208 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SKP1P63208 AC005332.8-201ENST00000622750 2735 ntBASIC16.6■□□□□ 0.25
SKP1P63208 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.6■□□□□ 0.25
SKP1P63208 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.6■□□□□ 0.25
SKP1P63208 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SKP1P63208 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.6■□□□□ 0.25
SKP1P63208 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.6■□□□□ 0.25
SKP1P63208 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SKP1P63208 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.6■□□□□ 0.25
SKP1P63208 AC134043.2-201ENST00000624206 2238 ntBASIC16.6■□□□□ 0.25
SKP1P63208 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.59■□□□□ 0.25
SKP1P63208 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 AC079776.2-201ENST00000641154 1609 ntBASIC16.59■□□□□ 0.25
SKP1P63208 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SKP1P63208 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SKP1P63208 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.59■□□□□ 0.25
SKP1P63208 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.59■□□□□ 0.25
SKP1P63208 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.59■□□□□ 0.25
SKP1P63208 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.59■□□□□ 0.25
SKP1P63208 AL121912.1-201ENST00000603683 238 ntBASIC16.59■□□□□ 0.25
SKP1P63208 AL139327.4-201ENST00000612362 153 ntBASIC16.59■□□□□ 0.25
SKP1P63208 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.59■□□□□ 0.25
SKP1P63208 AC073592.4-201ENST00000623827 446 ntBASIC16.59■□□□□ 0.25
SKP1P63208 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKP1P63208 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.59■□□□□ 0.25
SKP1P63208 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.59■□□□□ 0.25
SKP1P63208 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms