Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.35■□□□□ 0.05
SEC61A1P61619 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.35■□□□□ 0.05
SEC61A1P61619 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.35■□□□□ 0.05
SEC61A1P61619 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.35■□□□□ 0.05
SEC61A1P61619 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.35■□□□□ 0.05
SEC61A1P61619 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SEC61A1P61619 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.35■□□□□ 0.05
SEC61A1P61619 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SEC61A1P61619 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.35■□□□□ 0.05
SEC61A1P61619 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.35■□□□□ 0.05
SEC61A1P61619 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SEC61A1P61619 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SEC61A1P61619 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SEC61A1P61619 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SEC61A1P61619 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.34■□□□□ 0.05
SEC61A1P61619 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
SEC61A1P61619 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.34■□□□□ 0.05
SEC61A1P61619 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SEC61A1P61619 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SEC61A1P61619 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
SEC61A1P61619 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.34■□□□□ 0.05
SEC61A1P61619 HLA-F-220ENST00000434407 884 ntBASIC15.34■□□□□ 0.05
SEC61A1P61619 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.34■□□□□ 0.05
SEC61A1P61619 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.34■□□□□ 0.05
SEC61A1P61619 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.34■□□□□ 0.05
SEC61A1P61619 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.34■□□□□ 0.05
SEC61A1P61619 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.34■□□□□ 0.05
SEC61A1P61619 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
SEC61A1P61619 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SEC61A1P61619 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SEC61A1P61619 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SEC61A1P61619 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SEC61A1P61619 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SEC61A1P61619 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SEC61A1P61619 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SEC61A1P61619 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SEC61A1P61619 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.33■□□□□ 0.04
SEC61A1P61619 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.33■□□□□ 0.04
SEC61A1P61619 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.33■□□□□ 0.04
SEC61A1P61619 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.33■□□□□ 0.04
SEC61A1P61619 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.33■□□□□ 0.04
SEC61A1P61619 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.33■□□□□ 0.04
SEC61A1P61619 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.33■□□□□ 0.04
SEC61A1P61619 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
SEC61A1P61619 AC069148.1-201ENST00000608741 768 ntBASIC15.33■□□□□ 0.04
SEC61A1P61619 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.33■□□□□ 0.04
SEC61A1P61619 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SEC61A1P61619 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SEC61A1P61619 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SEC61A1P61619 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SEC61A1P61619 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.33■□□□□ 0.04
SEC61A1P61619 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.33■□□□□ 0.04
SEC61A1P61619 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.33■□□□□ 0.04
SEC61A1P61619 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SEC61A1P61619 AL096828.2-201ENST00000567259 1965 ntBASIC15.33■□□□□ 0.04
SEC61A1P61619 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.32■□□□□ 0.04
SEC61A1P61619 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SEC61A1P61619 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms