Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RAB38P57729 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB38P57729 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RAB38P57729 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAB38P57729 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB38P57729 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RAB38P57729 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.41■□□□□ 0.22
RAB38P57729 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB38P57729 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB38P57729 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.41■□□□□ 0.22
RAB38P57729 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB38P57729 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB38P57729 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB38P57729 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB38P57729 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB38P57729 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB38P57729 AL031008.1-201ENST00000619963 541 ntBASIC16.41■□□□□ 0.22
RAB38P57729 TP73-AS1-207ENST00000624167 988 ntBASIC16.41■□□□□ 0.22
RAB38P57729 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB38P57729 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 AC026471.1-201ENST00000564629 3026 ntBASIC16.41■□□□□ 0.22
RAB38P57729 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB38P57729 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB38P57729 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB38P57729 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB38P57729 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB38P57729 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB38P57729 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB38P57729 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB38P57729 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAB38P57729 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB38P57729 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB38P57729 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 AL135999.2-201ENST00000622438 1686 ntBASIC16.4■□□□□ 0.22
RAB38P57729 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB38P57729 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB38P57729 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB38P57729 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.39■□□□□ 0.22
RAB38P57729 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAB38P57729 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB38P57729 AC004817.3-201ENST00000602957 2129 ntBASIC16.39■□□□□ 0.21
RAB38P57729 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB38P57729 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB38P57729 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB38P57729 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB38P57729 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB38P57729 AC073648.2-201ENST00000510116 352 ntBASIC16.39■□□□□ 0.21
RAB38P57729 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB38P57729 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB38P57729 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB38P57729 AC021087.4-201ENST00000563761 564 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms