Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH13P55290 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH13P55290 AC083849.1-201ENST00000615227 514 ntBASIC17.11■□□□□ 0.33
CDH13P55290 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH13P55290 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH13P55290 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH13P55290 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH13P55290 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH13P55290 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH13P55290 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 AC116353.5-201ENST00000638148 1699 ntBASIC17.1■□□□□ 0.33
CDH13P55290 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDH13P55290 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH13P55290 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
CDH13P55290 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.1■□□□□ 0.33
CDH13P55290 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH13P55290 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH13P55290 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH13P55290 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.09■□□□□ 0.33
CDH13P55290 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH13P55290 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH13P55290 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 COX5BP2-201ENST00000392354 334 ntBASIC17.09■□□□□ 0.33
CDH13P55290 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH13P55290 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH13P55290 AC063952.2-201ENST00000498792 1227 ntBASIC17.09■□□□□ 0.33
CDH13P55290 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH13P55290 LINC01023-201ENST00000606054 436 ntBASIC17.09■□□□□ 0.33
CDH13P55290 AC097374.2-201ENST00000618617 1306 ntBASIC17.09■□□□□ 0.33
CDH13P55290 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH13P55290 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH13P55290 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDH13P55290 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
CDH13P55290 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDH13P55290 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH13P55290 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH13P55290 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH13P55290 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.08■□□□□ 0.33
CDH13P55290 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH13P55290 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH13P55290 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CDH13P55290 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.08■□□□□ 0.33
CDH13P55290 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.08■□□□□ 0.33
CDH13P55290 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH13P55290 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH13P55290 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.08■□□□□ 0.32
CDH13P55290 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CDH13P55290 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.08■□□□□ 0.32
CDH13P55290 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDH13P55290 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.08■□□□□ 0.32
CDH13P55290 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.08■□□□□ 0.32
CDH13P55290 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDH13P55290 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH13P55290 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH13P55290 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH13P55290 UBALD1-205ENST00000590891 2641 ntBASIC17.08■□□□□ 0.32
CDH13P55290 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms