Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.29■□□□□ 0.2
PSMD4P55036 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PSMD4P55036 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.29■□□□□ 0.2
PSMD4P55036 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PSMD4P55036 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.29■□□□□ 0.2
PSMD4P55036 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.29■□□□□ 0.2
PSMD4P55036 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.29■□□□□ 0.2
PSMD4P55036 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.29■□□□□ 0.2
PSMD4P55036 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.29■□□□□ 0.2
PSMD4P55036 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.29■□□□□ 0.2
PSMD4P55036 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PSMD4P55036 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
PSMD4P55036 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.29■□□□□ 0.2
PSMD4P55036 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.29■□□□□ 0.2
PSMD4P55036 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PSMD4P55036 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PSMD4P55036 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PSMD4P55036 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PSMD4P55036 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PSMD4P55036 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
PSMD4P55036 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
PSMD4P55036 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.28■□□□□ 0.2
PSMD4P55036 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PSMD4P55036 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.28■□□□□ 0.2
PSMD4P55036 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PSMD4P55036 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.28■□□□□ 0.2
PSMD4P55036 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.28■□□□□ 0.2
PSMD4P55036 IGHV3-47-201ENST00000425060 335 ntBASIC16.28■□□□□ 0.2
PSMD4P55036 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PSMD4P55036 HCG4P8-203ENST00000443049 980 ntBASIC16.28■□□□□ 0.2
PSMD4P55036 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 AC096582.2-201ENST00000510860 516 ntBASIC16.28■□□□□ 0.2
PSMD4P55036 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.28■□□□□ 0.2
PSMD4P55036 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PSMD4P55036 AP005901.3-202ENST00000581653 237 ntBASIC16.28■□□□□ 0.2
PSMD4P55036 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.28■□□□□ 0.2
PSMD4P55036 AC011467.2-201ENST00000598425 242 ntBASIC16.28■□□□□ 0.2
PSMD4P55036 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.28■□□□□ 0.2
PSMD4P55036 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PSMD4P55036 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PSMD4P55036 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PSMD4P55036 TP73-AS1-210ENST00000637775 1455 ntBASIC16.28■□□□□ 0.2
PSMD4P55036 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
PSMD4P55036 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PSMD4P55036 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PSMD4P55036 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.27■□□□□ 0.2
PSMD4P55036 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.27■□□□□ 0.2
PSMD4P55036 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PSMD4P55036 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PSMD4P55036 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.27■□□□□ 0.2
PSMD4P55036 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.27■□□□□ 0.2
PSMD4P55036 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PSMD4P55036 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.27■□□□□ 0.2
PSMD4P55036 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSMD4P55036 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PSMD4P55036 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.27■□□□□ 0.2
PSMD4P55036 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PSMD4P55036 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.27■□□□□ 0.2
PSMD4P55036 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.27■□□□□ 0.2
PSMD4P55036 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.27■□□□□ 0.2
PSMD4P55036 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.27■□□□□ 0.2
PSMD4P55036 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PSMD4P55036 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PSMD4P55036 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.27■□□□□ 0.2
PSMD4P55036 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PSMD4P55036 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.27■□□□□ 0.19
PSMD4P55036 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms