Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.21■□□□□ 0.67
PMS1P54277 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.21■□□□□ 0.67
PMS1P54277 STK25P1-201ENST00000585406 838 ntBASIC19.21■□□□□ 0.67
PMS1P54277 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.21■□□□□ 0.67
PMS1P54277 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.21■□□□□ 0.67
PMS1P54277 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PMS1P54277 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PMS1P54277 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.21■□□□□ 0.67
PMS1P54277 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMS1P54277 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PMS1P54277 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.2■□□□□ 0.66
PMS1P54277 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.2■□□□□ 0.66
PMS1P54277 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PMS1P54277 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.2■□□□□ 0.66
PMS1P54277 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.2■□□□□ 0.66
PMS1P54277 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.2■□□□□ 0.66
PMS1P54277 AC087388.1-201ENST00000571370 1112 ntBASIC19.2■□□□□ 0.66
PMS1P54277 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.2■□□□□ 0.66
PMS1P54277 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.2■□□□□ 0.66
PMS1P54277 AC011467.2-201ENST00000598425 242 ntBASIC19.2■□□□□ 0.66
PMS1P54277 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PMS1P54277 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
PMS1P54277 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.2■□□□□ 0.66
PMS1P54277 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.2■□□□□ 0.66
PMS1P54277 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 AC005915.1-201ENST00000624912 2018 ntBASIC19.2■□□□□ 0.66
PMS1P54277 KRT18P1-202ENST00000452408 1331 ntBASIC19.2■□□□□ 0.66
PMS1P54277 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMS1P54277 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PMS1P54277 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PMS1P54277 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.19■□□□□ 0.66
PMS1P54277 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 AC132938.5-201ENST00000624980 1813 ntBASIC19.19■□□□□ 0.66
PMS1P54277 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.19■□□□□ 0.66
PMS1P54277 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 MYCLP1-201ENST00000372451 1075 ntBASIC19.19■□□□□ 0.66
PMS1P54277 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.19■□□□□ 0.66
PMS1P54277 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 DRAXINP1-201ENST00000437611 948 ntBASIC19.19■□□□□ 0.66
PMS1P54277 MIR3180-1-201ENST00000580374 94 ntBASIC19.19■□□□□ 0.66
PMS1P54277 MIR3180-3-201ENST00000584616 94 ntBASIC19.19■□□□□ 0.66
PMS1P54277 AP002414.4-201ENST00000589764 1148 ntBASIC19.19■□□□□ 0.66
PMS1P54277 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PMS1P54277 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.19■□□□□ 0.66
PMS1P54277 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.19■□□□□ 0.66
PMS1P54277 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.19■□□□□ 0.66
PMS1P54277 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.19■□□□□ 0.66
PMS1P54277 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.19■□□□□ 0.66
PMS1P54277 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.19■□□□□ 0.66
PMS1P54277 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PMS1P54277 IER3-202ENST00000376377 1350 ntBASIC19.19■□□□□ 0.66
PMS1P54277 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PMS1P54277 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 AC124067.4-201ENST00000519691 2379 ntBASIC19.18■□□□□ 0.66
PMS1P54277 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 TP73-AS1-210ENST00000637775 1455 ntBASIC19.18■□□□□ 0.66
PMS1P54277 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PMS1P54277 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PMS1P54277 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.18■□□□□ 0.66
PMS1P54277 AC103564.2-201ENST00000432853 1299 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms