Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC30.87■■■□□ 2.53
SMARCA4P51532 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
SMARCA4P51532 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC30.87■■■□□ 2.53
SMARCA4P51532 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC30.87■■■□□ 2.53
SMARCA4P51532 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC30.87■■■□□ 2.53
SMARCA4P51532 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC30.87■■■□□ 2.53
SMARCA4P51532 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC30.87■■■□□ 2.53
SMARCA4P51532 AL031055.1-201ENST00000606362 631 ntBASIC30.87■■■□□ 2.53
SMARCA4P51532 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC30.87■■■□□ 2.53
SMARCA4P51532 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
SMARCA4P51532 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC30.87■■■□□ 2.53
SMARCA4P51532 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC30.87■■■□□ 2.53
SMARCA4P51532 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCA4P51532 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCA4P51532 REXO1L9P-201ENST00000604264 2108 ntBASIC30.87■■■□□ 2.53
SMARCA4P51532 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC30.87■■■□□ 2.53
SMARCA4P51532 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
SMARCA4P51532 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC30.86■■■□□ 2.53
SMARCA4P51532 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMARCA4P51532 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC30.86■■■□□ 2.53
SMARCA4P51532 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMARCA4P51532 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SMARCA4P51532 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC30.86■■■□□ 2.53
SMARCA4P51532 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
SMARCA4P51532 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC30.86■■■□□ 2.53
SMARCA4P51532 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SMARCA4P51532 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC30.85■■■□□ 2.53
SMARCA4P51532 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 WIZP1-201ENST00000531444 2299 ntBASIC30.85■■■□□ 2.53
SMARCA4P51532 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 AC241585.1-201ENST00000433527 519 ntBASIC30.85■■■□□ 2.53
SMARCA4P51532 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC30.85■■■□□ 2.53
SMARCA4P51532 NOP2-220ENST00000545915 630 ntTSL 2 BASIC30.85■■■□□ 2.53
SMARCA4P51532 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 AC008267.7-201ENST00000624570 1194 ntBASIC30.85■■■□□ 2.53
SMARCA4P51532 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
SMARCA4P51532 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
SMARCA4P51532 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
SMARCA4P51532 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCA4P51532 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC30.85■■■□□ 2.53
SMARCA4P51532 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCA4P51532 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC30.84■■■□□ 2.53
SMARCA4P51532 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
SMARCA4P51532 HLA-V-201ENST00000429037 534 ntBASIC30.84■■■□□ 2.53
SMARCA4P51532 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC30.84■■■□□ 2.53
SMARCA4P51532 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC30.84■■■□□ 2.53
SMARCA4P51532 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
SMARCA4P51532 AL596325.1-201ENST00000563991 1082 ntBASIC30.84■■■□□ 2.53
SMARCA4P51532 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC30.84■■■□□ 2.53
SMARCA4P51532 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCA4P51532 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC30.84■■■□□ 2.53
SMARCA4P51532 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCA4P51532 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
SMARCA4P51532 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC30.84■■■□□ 2.53
SMARCA4P51532 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCA4P51532 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCA4P51532 HLA-DQB1-201ENST00000374943 1656 ntBASIC30.84■■■□□ 2.53
SMARCA4P51532 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCA4P51532 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCA4P51532 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC30.84■■■□□ 2.53
SMARCA4P51532 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SMARCA4P51532 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC30.84■■■□□ 2.53
SMARCA4P51532 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC30.84■■■□□ 2.53
SMARCA4P51532 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC30.84■■■□□ 2.53
SMARCA4P51532 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCA4P51532 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC30.83■■■□□ 2.53
SMARCA4P51532 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCA4P51532 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC30.83■■■□□ 2.53
SMARCA4P51532 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCA4P51532 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCA4P51532 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC30.83■■■□□ 2.53
SMARCA4P51532 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCA4P51532 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCA4P51532 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC30.83■■■□□ 2.53
SMARCA4P51532 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC30.83■■■□□ 2.53
SMARCA4P51532 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC30.83■■■□□ 2.53
SMARCA4P51532 CR383656.12-201ENST00000549567 513 ntBASIC30.83■■■□□ 2.53
SMARCA4P51532 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCA4P51532 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCA4P51532 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCA4P51532 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC30.82■■■□□ 2.52
SMARCA4P51532 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC30.82■■■□□ 2.52
SMARCA4P51532 IGHV3-62-201ENST00000520057 340 ntBASIC30.82■■■□□ 2.52
SMARCA4P51532 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC30.82■■■□□ 2.52
SMARCA4P51532 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC30.82■■■□□ 2.52
SMARCA4P51532 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCA4P51532 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC30.82■■■□□ 2.52
SMARCA4P51532 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCA4P51532 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC30.82■■■□□ 2.52
SMARCA4P51532 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA4P51532 FLJ13224-201ENST00000313737 1514 ntBASIC30.81■■■□□ 2.52
SMARCA4P51532 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA4P51532 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA4P51532 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC30.81■■■□□ 2.52
SMARCA4P51532 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms