Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AP000550.4-202ENST00000639755 178 ntBASIC16.27■□□□□ 0.2
RNF144AP50876 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF144AP50876 AC099398.1-201ENST00000567919 2776 ntBASIC16.27■□□□□ 0.2
RNF144AP50876 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF144AP50876 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF144AP50876 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF144AP50876 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF144AP50876 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RNF144AP50876 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF144AP50876 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF144AP50876 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF144AP50876 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RNF144AP50876 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF144AP50876 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF144AP50876 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF144AP50876 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF144AP50876 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF144AP50876 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF144AP50876 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.26■□□□□ 0.19
RNF144AP50876 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF144AP50876 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF144AP50876 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF144AP50876 AC007967.3-201ENST00000434308 558 ntBASIC16.26■□□□□ 0.19
RNF144AP50876 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF144AP50876 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF144AP50876 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RNF144AP50876 AL589935.2-201ENST00000616471 1231 ntBASIC16.26■□□□□ 0.19
RNF144AP50876 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.26■□□□□ 0.19
RNF144AP50876 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF144AP50876 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 HLA-J-201ENST00000462773 1622 ntBASIC16.26■□□□□ 0.19
RNF144AP50876 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RNF144AP50876 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF144AP50876 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF144AP50876 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF144AP50876 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF144AP50876 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF144AP50876 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF144AP50876 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RNF144AP50876 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RNF144AP50876 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF144AP50876 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 AC011270.2-201ENST00000624293 2550 ntBASIC16.25■□□□□ 0.19
RNF144AP50876 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF144AP50876 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RNF144AP50876 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF144AP50876 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 DDX43P3-201ENST00000441064 443 ntBASIC16.25■□□□□ 0.19
RNF144AP50876 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF144AP50876 AP000867.3-201ENST00000524675 377 ntBASIC16.25■□□□□ 0.19
RNF144AP50876 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF144AP50876 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF144AP50876 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF144AP50876 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RNF144AP50876 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF144AP50876 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RNF144AP50876 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
RNF144AP50876 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF144AP50876 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF144AP50876 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF144AP50876 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RNF144AP50876 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF144AP50876 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF144AP50876 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF144AP50876 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms