Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASP4P49662 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASP4P49662 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASP4P49662 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.04■□□□□ 0.64
CASP4P49662 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASP4P49662 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.04■□□□□ 0.64
CASP4P49662 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CASP4P49662 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.04■□□□□ 0.64
CASP4P49662 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.04■□□□□ 0.64
CASP4P49662 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.04■□□□□ 0.64
CASP4P49662 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.04■□□□□ 0.64
CASP4P49662 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.04■□□□□ 0.64
CASP4P49662 AL591684.3-201ENST00000605187 298 ntBASIC19.04■□□□□ 0.64
CASP4P49662 AC009336.1-201ENST00000608941 1553 ntBASIC19.04■□□□□ 0.64
CASP4P49662 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.04■□□□□ 0.64
CASP4P49662 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CASP4P49662 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.04■□□□□ 0.64
CASP4P49662 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CASP4P49662 AC022211.2-201ENST00000585075 2527 ntBASIC19.04■□□□□ 0.64
CASP4P49662 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CASP4P49662 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.04■□□□□ 0.64
CASP4P49662 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CASP4P49662 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.04■□□□□ 0.64
CASP4P49662 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.04■□□□□ 0.64
CASP4P49662 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASP4P49662 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASP4P49662 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CASP4P49662 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.03■□□□□ 0.64
CASP4P49662 TSPY19P-201ENST00000418461 509 ntBASIC19.03■□□□□ 0.64
CASP4P49662 TSPY18P-201ENST00000441642 509 ntBASIC19.03■□□□□ 0.64
CASP4P49662 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.03■□□□□ 0.64
CASP4P49662 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.03■□□□□ 0.64
CASP4P49662 KRT18P31-201ENST00000506277 1292 ntBASIC19.03■□□□□ 0.64
CASP4P49662 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.03■□□□□ 0.64
CASP4P49662 STK19B-204ENST00000512515 211 ntBASIC19.03■□□□□ 0.64
CASP4P49662 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.03■□□□□ 0.64
CASP4P49662 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.03■□□□□ 0.64
CASP4P49662 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.03■□□□□ 0.64
CASP4P49662 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CASP4P49662 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CASP4P49662 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 AC148477.5-201ENST00000625164 1645 ntBASIC19.03■□□□□ 0.64
CASP4P49662 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CASP4P49662 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASP4P49662 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CASP4P49662 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.02■□□□□ 0.64
CASP4P49662 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
CASP4P49662 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CASP4P49662 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASP4P49662 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CASP4P49662 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CASP4P49662 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.02■□□□□ 0.64
CASP4P49662 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASP4P49662 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CASP4P49662 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASP4P49662 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASP4P49662 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CASP4P49662 KLF4P1-201ENST00000412782 1185 ntBASIC19.02■□□□□ 0.64
CASP4P49662 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.02■□□□□ 0.64
CASP4P49662 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.02■□□□□ 0.64
CASP4P49662 DUSP5P1-201ENST00000441325 1139 ntBASIC19.02■□□□□ 0.64
CASP4P49662 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.02■□□□□ 0.64
CASP4P49662 ABCD1P5-201ENST00000445663 754 ntBASIC19.02■□□□□ 0.64
CASP4P49662 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.02■□□□□ 0.64
CASP4P49662 KRT16P4-201ENST00000453883 522 ntBASIC19.02■□□□□ 0.64
CASP4P49662 AC132008.2-207ENST00000454517 770 ntBASIC19.02■□□□□ 0.64
CASP4P49662 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CASP4P49662 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASP4P49662 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASP4P49662 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CASP4P49662 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASP4P49662 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CASP4P49662 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
CASP4P49662 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CASP4P49662 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASP4P49662 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CASP4P49662 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CASP4P49662 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms