Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AL136038.4-201ENST00000603606 1261 ntBASIC11.13□□□□□ -0.63
UBE2AP49459 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
UBE2AP49459 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
UBE2AP49459 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2AP49459 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2AP49459 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
UBE2AP49459 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC11.13□□□□□ -0.63
UBE2AP49459 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
UBE2AP49459 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2AP49459 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.12□□□□□ -0.63
UBE2AP49459 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 AC012317.2-201ENST00000623305 2251 ntBASIC11.12□□□□□ -0.63
UBE2AP49459 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 EML3-212ENST00000494176 2901 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 EML3-216ENST00000529309 2909 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 AC141586.5-201ENST00000624546 2050 ntBASIC11.12□□□□□ -0.63
UBE2AP49459 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
UBE2AP49459 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.12□□□□□ -0.63
UBE2AP49459 ZNF444P1-201ENST00000559497 298 ntBASIC11.12□□□□□ -0.63
UBE2AP49459 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.12□□□□□ -0.63
UBE2AP49459 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.12□□□□□ -0.63
UBE2AP49459 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.12□□□□□ -0.63
UBE2AP49459 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
UBE2AP49459 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UBE2AP49459 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2AP49459 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2AP49459 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UBE2AP49459 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
UBE2AP49459 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
UBE2AP49459 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2AP49459 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms