Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.54■□□□□ 0.88
NEDD4P46934 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.53■□□□□ 0.88
NEDD4P46934 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 PRYP5-201ENST00000451909 266 ntBASIC20.53■□□□□ 0.88
NEDD4P46934 AF186996.4-201ENST00000467186 377 ntBASIC20.53■□□□□ 0.88
NEDD4P46934 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.53■□□□□ 0.88
NEDD4P46934 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.53■□□□□ 0.88
NEDD4P46934 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NEDD4P46934 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.53■□□□□ 0.88
NEDD4P46934 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.53■□□□□ 0.88
NEDD4P46934 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 AC097637.2-201ENST00000624096 1997 ntBASIC20.53■□□□□ 0.88
NEDD4P46934 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.53■□□□□ 0.88
NEDD4P46934 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.53■□□□□ 0.88
NEDD4P46934 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NEDD4P46934 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NEDD4P46934 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.53■□□□□ 0.88
NEDD4P46934 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.53■□□□□ 0.88
NEDD4P46934 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NEDD4P46934 AC012640.2-201ENST00000561606 901 ntBASIC20.53■□□□□ 0.88
NEDD4P46934 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.53■□□□□ 0.88
NEDD4P46934 AL773604.1-201ENST00000617417 272 ntBASIC20.53■□□□□ 0.88
NEDD4P46934 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.53■□□□□ 0.88
NEDD4P46934 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4P46934 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4P46934 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NEDD4P46934 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.52■□□□□ 0.88
NEDD4P46934 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.52■□□□□ 0.87
NEDD4P46934 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NEDD4P46934 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.52■□□□□ 0.87
NEDD4P46934 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NEDD4P46934 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NEDD4P46934 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.52■□□□□ 0.87
NEDD4P46934 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.52■□□□□ 0.87
NEDD4P46934 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.52■□□□□ 0.87
NEDD4P46934 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.52■□□□□ 0.87
NEDD4P46934 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.52■□□□□ 0.87
NEDD4P46934 FAM215A-202ENST00000632077 792 ntBASIC20.52■□□□□ 0.87
NEDD4P46934 AC107918.4-202ENST00000641623 219 ntBASIC20.52■□□□□ 0.87
NEDD4P46934 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NEDD4P46934 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.51■□□□□ 0.87
NEDD4P46934 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NEDD4P46934 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NEDD4P46934 HLA-A-201ENST00000376802 1334 ntBASIC20.51■□□□□ 0.87
NEDD4P46934 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NEDD4P46934 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.51■□□□□ 0.87
NEDD4P46934 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 LINC00982-205ENST00000420957 435 ntBASIC20.51■□□□□ 0.87
NEDD4P46934 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4P46934 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.51■□□□□ 0.87
NEDD4P46934 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.51■□□□□ 0.87
NEDD4P46934 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms