Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.18■□□□□ 0.18
HTR3AP46098 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.18■□□□□ 0.18
HTR3AP46098 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.18■□□□□ 0.18
HTR3AP46098 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.18■□□□□ 0.18
HTR3AP46098 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.18■□□□□ 0.18
HTR3AP46098 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.18■□□□□ 0.18
HTR3AP46098 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.18■□□□□ 0.18
HTR3AP46098 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
HTR3AP46098 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.18■□□□□ 0.18
HTR3AP46098 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.18■□□□□ 0.18
HTR3AP46098 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HTR3AP46098 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.18■□□□□ 0.18
HTR3AP46098 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.18■□□□□ 0.18
HTR3AP46098 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3AP46098 PCDHB19P-201ENST00000570871 2371 ntBASIC16.18■□□□□ 0.18
HTR3AP46098 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HTR3AP46098 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.17■□□□□ 0.18
HTR3AP46098 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HTR3AP46098 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.17■□□□□ 0.18
HTR3AP46098 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 AL121761.2-201ENST00000598007 1648 ntBASIC16.17■□□□□ 0.18
HTR3AP46098 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.17■□□□□ 0.18
HTR3AP46098 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 PCED1CP-201ENST00000419887 785 ntBASIC16.17■□□□□ 0.18
HTR3AP46098 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.17■□□□□ 0.18
HTR3AP46098 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 RN7SL606P-201ENST00000472779 293 ntBASIC16.17■□□□□ 0.18
HTR3AP46098 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.17■□□□□ 0.18
HTR3AP46098 AC011840.4-201ENST00000578471 627 ntBASIC16.17■□□□□ 0.18
HTR3AP46098 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.17■□□□□ 0.18
HTR3AP46098 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.17■□□□□ 0.18
HTR3AP46098 AC116407.4-201ENST00000623319 1061 ntBASIC16.17■□□□□ 0.18
HTR3AP46098 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.17■□□□□ 0.18
HTR3AP46098 BX276092.7-203ENST00000637198 1536 ntBASIC16.17■□□□□ 0.18
HTR3AP46098 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.17■□□□□ 0.18
HTR3AP46098 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 AC097374.2-201ENST00000618617 1306 ntBASIC16.17■□□□□ 0.18
HTR3AP46098 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HTR3AP46098 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HTR3AP46098 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
HTR3AP46098 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.17■□□□□ 0.18
HTR3AP46098 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
HTR3AP46098 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.16■□□□□ 0.18
HTR3AP46098 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HTR3AP46098 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 IER3-202ENST00000376377 1350 ntBASIC16.16■□□□□ 0.18
HTR3AP46098 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.16■□□□□ 0.18
HTR3AP46098 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.16■□□□□ 0.18
HTR3AP46098 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HTR3AP46098 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HTR3AP46098 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.16■□□□□ 0.18
HTR3AP46098 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.16■□□□□ 0.18
HTR3AP46098 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.16■□□□□ 0.18
HTR3AP46098 CHCHD2P8-201ENST00000429873 447 ntBASIC16.16■□□□□ 0.18
HTR3AP46098 VENTXP7-201ENST00000475503 772 ntBASIC16.16■□□□□ 0.18
HTR3AP46098 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.16■□□□□ 0.18
HTR3AP46098 AL592071.1-201ENST00000611956 408 ntBASIC16.16■□□□□ 0.18
HTR3AP46098 AC124864.1-201ENST00000623408 392 ntBASIC16.16■□□□□ 0.18
HTR3AP46098 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HTR3AP46098 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HTR3AP46098 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms