Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.63■□□□□ 0.57
SSR1P43307 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 Z83836.1-201ENST00000624605 1642 ntBASIC18.63■□□□□ 0.57
SSR1P43307 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SSR1P43307 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
SSR1P43307 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSR1P43307 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.62■□□□□ 0.57
SSR1P43307 DDX43P3-201ENST00000441064 443 ntBASIC18.62■□□□□ 0.57
SSR1P43307 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.62■□□□□ 0.57
SSR1P43307 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SSR1P43307 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.62■□□□□ 0.57
SSR1P43307 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SSR1P43307 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SSR1P43307 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 HLA-J-201ENST00000462773 1622 ntBASIC18.62■□□□□ 0.57
SSR1P43307 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SSR1P43307 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSR1P43307 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SSR1P43307 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.61■□□□□ 0.57
SSR1P43307 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.61■□□□□ 0.57
SSR1P43307 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.61■□□□□ 0.57
SSR1P43307 REXO1L11P-201ENST00000620964 1927 ntBASIC18.61■□□□□ 0.57
SSR1P43307 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.61■□□□□ 0.57
SSR1P43307 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.61■□□□□ 0.57
SSR1P43307 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.61■□□□□ 0.57
SSR1P43307 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.61■□□□□ 0.57
SSR1P43307 MTCL1P1-201ENST00000446207 792 ntBASIC18.61■□□□□ 0.57
SSR1P43307 AC063952.2-201ENST00000498792 1227 ntBASIC18.61■□□□□ 0.57
SSR1P43307 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.61■□□□□ 0.57
SSR1P43307 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.61■□□□□ 0.57
SSR1P43307 HYMAI.1-201ENST00000620949 238 ntBASIC18.61■□□□□ 0.57
SSR1P43307 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.61■□□□□ 0.57
SSR1P43307 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSR1P43307 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.6■□□□□ 0.57
SSR1P43307 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 CROCCP2-202ENST00000412962 2773 ntBASIC18.6■□□□□ 0.57
SSR1P43307 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.6■□□□□ 0.57
SSR1P43307 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SSR1P43307 AC124067.4-201ENST00000519691 2379 ntBASIC18.6■□□□□ 0.57
SSR1P43307 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SSR1P43307 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.6■□□□□ 0.57
SSR1P43307 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SSR1P43307 TMPOP1-202ENST00000424642 1267 ntBASIC18.6■□□□□ 0.57
SSR1P43307 AL671277.2-201ENST00000458060 996 ntBASIC18.6■□□□□ 0.57
SSR1P43307 AC022616.7-201ENST00000525383 220 ntBASIC18.6■□□□□ 0.57
SSR1P43307 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.6■□□□□ 0.57
SSR1P43307 LINC01238-205ENST00000567549 1107 ntBASIC18.6■□□□□ 0.57
SSR1P43307 RNF126P1-202ENST00000569893 925 ntBASIC18.6■□□□□ 0.57
SSR1P43307 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.6■□□□□ 0.57
SSR1P43307 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms