Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.13■□□□□ 0.65
KRT9P35527 TSPY12P-201ENST00000421279 868 ntBASIC19.13■□□□□ 0.65
KRT9P35527 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.13■□□□□ 0.65
KRT9P35527 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.13■□□□□ 0.65
KRT9P35527 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
KRT9P35527 GPR32P1-201ENST00000601788 811 ntBASIC19.13■□□□□ 0.65
KRT9P35527 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.13■□□□□ 0.65
KRT9P35527 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.13■□□□□ 0.65
KRT9P35527 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KRT9P35527 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT9P35527 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.13■□□□□ 0.65
KRT9P35527 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT9P35527 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
KRT9P35527 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT9P35527 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KRT9P35527 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
KRT9P35527 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KRT9P35527 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT9P35527 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
KRT9P35527 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
KRT9P35527 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 AC116353.5-201ENST00000638148 1699 ntBASIC19.12■□□□□ 0.65
KRT9P35527 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 AL353692.3-201ENST00000407031 1396 ntBASIC19.12■□□□□ 0.65
KRT9P35527 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.12■□□□□ 0.65
KRT9P35527 AL049597.2-201ENST00000565575 961 ntBASIC19.12■□□□□ 0.65
KRT9P35527 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.12■□□□□ 0.65
KRT9P35527 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
KRT9P35527 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
KRT9P35527 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT9P35527 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KRT9P35527 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
KRT9P35527 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT9P35527 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.12■□□□□ 0.65
KRT9P35527 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT9P35527 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT9P35527 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT9P35527 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KRT9P35527 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT9P35527 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KRT9P35527 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.11■□□□□ 0.65
KRT9P35527 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT9P35527 FAM210CP-201ENST00000445714 574 ntBASIC19.11■□□□□ 0.65
KRT9P35527 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.11■□□□□ 0.65
KRT9P35527 AC005332.3-201ENST00000589904 676 ntBASIC19.11■□□□□ 0.65
KRT9P35527 AC083849.1-201ENST00000615227 514 ntBASIC19.11■□□□□ 0.65
KRT9P35527 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.11■□□□□ 0.65
KRT9P35527 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT9P35527 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KRT9P35527 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KRT9P35527 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KRT9P35527 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
KRT9P35527 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT9P35527 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms