Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL365203.3-201ENST00000609742 2057 ntBASIC19.9■□□□□ 0.78
CLCN1P35523 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CLCN1P35523 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCN1P35523 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CLCN1P35523 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.9■□□□□ 0.78
CLCN1P35523 AL596275.1-201ENST00000423464 877 ntBASIC19.9■□□□□ 0.78
CLCN1P35523 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.9■□□□□ 0.78
CLCN1P35523 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCN1P35523 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCN1P35523 KRT8P9-201ENST00000558927 1449 ntBASIC19.9■□□□□ 0.78
CLCN1P35523 AC092338.2-201ENST00000568827 1415 ntBASIC19.9■□□□□ 0.78
CLCN1P35523 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.9■□□□□ 0.78
CLCN1P35523 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCN1P35523 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CLCN1P35523 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLCN1P35523 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLCN1P35523 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLCN1P35523 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLCN1P35523 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLCN1P35523 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLCN1P35523 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CLCN1P35523 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 TSPY17P-201ENST00000450329 467 ntBASIC19.89■□□□□ 0.77
CLCN1P35523 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLCN1P35523 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.89■□□□□ 0.77
CLCN1P35523 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLCN1P35523 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLCN1P35523 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.89■□□□□ 0.77
CLCN1P35523 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN1P35523 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCN1P35523 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 CYP2D8P-201ENST00000433633 1490 ntBASIC19.88■□□□□ 0.77
CLCN1P35523 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLCN1P35523 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 INGX-201ENST00000359239 846 ntBASIC19.88■□□□□ 0.77
CLCN1P35523 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCN1P35523 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCN1P35523 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.88■□□□□ 0.77
CLCN1P35523 AC066615.1-201ENST00000640911 628 ntBASIC19.88■□□□□ 0.77
CLCN1P35523 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCN1P35523 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLCN1P35523 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CLCN1P35523 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CLCN1P35523 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN1P35523 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CLCN1P35523 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLCN1P35523 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLCN1P35523 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLCN1P35523 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN1P35523 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN1P35523 AC007663.1-201ENST00000438948 1240 ntBASIC19.87■□□□□ 0.77
CLCN1P35523 AC093827.2-201ENST00000512654 315 ntBASIC19.87■□□□□ 0.77
CLCN1P35523 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN1P35523 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.87■□□□□ 0.77
CLCN1P35523 MIR3180-5-201ENST00000583743 153 ntBASIC19.87■□□□□ 0.77
CLCN1P35523 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.87■□□□□ 0.77
CLCN1P35523 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN1P35523 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms