Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.8■■□□□ 1.08
RFC4P35249 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.8■■□□□ 1.08
RFC4P35249 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RFC4P35249 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.8■■□□□ 1.08
RFC4P35249 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RFC4P35249 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.8■■□□□ 1.08
RFC4P35249 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC4P35249 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC4P35249 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RFC4P35249 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC4P35249 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RFC4P35249 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RFC4P35249 AC046185.3-201ENST00000623228 1824 ntBASIC21.79■■□□□ 1.08
RFC4P35249 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.79■■□□□ 1.08
RFC4P35249 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.79■■□□□ 1.08
RFC4P35249 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.79■■□□□ 1.08
RFC4P35249 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 AC012645.4-201ENST00000610691 1061 ntBASIC21.79■■□□□ 1.08
RFC4P35249 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
RFC4P35249 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.79■■□□□ 1.08
RFC4P35249 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC4P35249 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RFC4P35249 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.78■■□□□ 1.08
RFC4P35249 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 AC107890.1-201ENST00000422478 521 ntBASIC21.78■■□□□ 1.08
RFC4P35249 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RFC4P35249 AL135744.1-201ENST00000565098 629 ntBASIC21.78■■□□□ 1.08
RFC4P35249 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.78■■□□□ 1.08
RFC4P35249 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.78■■□□□ 1.08
RFC4P35249 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.78■■□□□ 1.08
RFC4P35249 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.78■■□□□ 1.08
RFC4P35249 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.78■■□□□ 1.08
RFC4P35249 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFC4P35249 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.77■■□□□ 1.08
RFC4P35249 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.77■■□□□ 1.08
RFC4P35249 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RFC4P35249 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.77■■□□□ 1.08
RFC4P35249 MIR661-201ENST00000384842 89 ntBASIC21.77■■□□□ 1.08
RFC4P35249 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RFC4P35249 RBPMS2P1-201ENST00000437762 623 ntBASIC21.77■■□□□ 1.08
RFC4P35249 AC125807.1-201ENST00000483097 614 ntBASIC21.77■■□□□ 1.08
RFC4P35249 AC005225.4-201ENST00000557330 545 ntBASIC21.77■■□□□ 1.08
RFC4P35249 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 RARRES2P8-201ENST00000566335 367 ntBASIC21.77■■□□□ 1.08
RFC4P35249 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.77■■□□□ 1.08
RFC4P35249 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.77■■□□□ 1.08
RFC4P35249 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.77■■□□□ 1.08
RFC4P35249 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 AP000997.3-201ENST00000623333 2250 ntBASIC21.77■■□□□ 1.08
RFC4P35249 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RFC4P35249 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.77■■□□□ 1.08
RFC4P35249 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC4P35249 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RFC4P35249 AKAP8P1-201ENST00000434743 1349 ntBASIC21.77■■□□□ 1.07
RFC4P35249 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.77■■□□□ 1.07
RFC4P35249 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RFC4P35249 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.76■■□□□ 1.07
RFC4P35249 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC4P35249 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RFC4P35249 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RFC4P35249 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
RFC4P35249 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC4P35249 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFC4P35249 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.76■■□□□ 1.07
RFC4P35249 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.76■■□□□ 1.07
RFC4P35249 GPS2P2-201ENST00000430745 888 ntBASIC21.76■■□□□ 1.07
RFC4P35249 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.76■■□□□ 1.07
RFC4P35249 UGT1A2P-201ENST00000454886 866 ntBASIC21.76■■□□□ 1.07
RFC4P35249 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RFC4P35249 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.76■■□□□ 1.07
RFC4P35249 DUX4L17-201ENST00000557360 1267 ntBASIC21.76■■□□□ 1.07
RFC4P35249 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.76■■□□□ 1.07
RFC4P35249 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms