Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 FAM207BP-201ENST00000447172 505 ntBASIC17.57■□□□□ 0.4
LSP1P33241 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 KRT16P5-201ENST00000455284 522 ntBASIC17.57■□□□□ 0.4
LSP1P33241 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
LSP1P33241 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.57■□□□□ 0.4
LSP1P33241 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.57■□□□□ 0.4
LSP1P33241 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.57■□□□□ 0.4
LSP1P33241 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 LINC00167-201ENST00000530583 1419 ntBASIC17.56■□□□□ 0.4
LSP1P33241 KRT8P7-201ENST00000533003 1432 ntBASIC17.56■□□□□ 0.4
LSP1P33241 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.56■□□□□ 0.4
LSP1P33241 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LSP1P33241 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LSP1P33241 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.56■□□□□ 0.4
LSP1P33241 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.56■□□□□ 0.4
LSP1P33241 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.56■□□□□ 0.4
LSP1P33241 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LSP1P33241 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.56■□□□□ 0.4
LSP1P33241 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LSP1P33241 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.56■□□□□ 0.4
LSP1P33241 FER1L4-210ENST00000615531 5998 ntBASIC17.56■□□□□ 0.4
LSP1P33241 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.56■□□□□ 0.4
LSP1P33241 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSP1P33241 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.55■□□□□ 0.4
LSP1P33241 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
LSP1P33241 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
LSP1P33241 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
LSP1P33241 AC126177.1-201ENST00000547829 2218 ntBASIC17.55■□□□□ 0.4
LSP1P33241 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.55■□□□□ 0.4
LSP1P33241 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LSP1P33241 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.55■□□□□ 0.4
LSP1P33241 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.55■□□□□ 0.4
LSP1P33241 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LSP1P33241 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.55■□□□□ 0.4
LSP1P33241 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.55■□□□□ 0.4
LSP1P33241 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LSP1P33241 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSP1P33241 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.54■□□□□ 0.4
LSP1P33241 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.54■□□□□ 0.4
LSP1P33241 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LSP1P33241 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.54■□□□□ 0.4
LSP1P33241 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.54■□□□□ 0.4
LSP1P33241 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LSP1P33241 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.54■□□□□ 0.4
LSP1P33241 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.54■□□□□ 0.4
LSP1P33241 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.54■□□□□ 0.4
LSP1P33241 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 AC130371.2-201ENST00000619443 611 ntBASIC17.54■□□□□ 0.4
LSP1P33241 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms