Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.53■■□□□ 1.04
TM4SF1P30408 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.52■■□□□ 1.04
TM4SF1P30408 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.52■■□□□ 1.04
TM4SF1P30408 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.52■■□□□ 1.04
TM4SF1P30408 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.52■■□□□ 1.04
TM4SF1P30408 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TM4SF1P30408 SPDYE14P-201ENST00000442619 822 ntBASIC21.52■■□□□ 1.04
TM4SF1P30408 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.52■■□□□ 1.04
TM4SF1P30408 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TM4SF1P30408 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TM4SF1P30408 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.52■■□□□ 1.04
TM4SF1P30408 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.52■■□□□ 1.04
TM4SF1P30408 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TM4SF1P30408 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TM4SF1P30408 AC093503.3-201ENST00000624917 2352 ntBASIC21.52■■□□□ 1.04
TM4SF1P30408 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.52■■□□□ 1.03
TM4SF1P30408 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TM4SF1P30408 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.52■■□□□ 1.03
TM4SF1P30408 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TM4SF1P30408 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 REXO1L11P-201ENST00000620964 1927 ntBASIC21.51■■□□□ 1.03
TM4SF1P30408 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.51■■□□□ 1.03
TM4SF1P30408 KRT18P55-202ENST00000578578 1546 ntBASIC21.51■■□□□ 1.03
TM4SF1P30408 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.51■■□□□ 1.03
TM4SF1P30408 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.51■■□□□ 1.03
TM4SF1P30408 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.51■■□□□ 1.03
TM4SF1P30408 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.51■■□□□ 1.03
TM4SF1P30408 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.51■■□□□ 1.03
TM4SF1P30408 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TM4SF1P30408 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.51■■□□□ 1.03
TM4SF1P30408 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.51■■□□□ 1.03
TM4SF1P30408 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM4SF1P30408 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.5■■□□□ 1.03
TM4SF1P30408 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.5■■□□□ 1.03
TM4SF1P30408 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TM4SF1P30408 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TM4SF1P30408 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 AC125807.1-201ENST00000483097 614 ntBASIC21.5■■□□□ 1.03
TM4SF1P30408 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.5■■□□□ 1.03
TM4SF1P30408 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 KRT8P23-201ENST00000560090 1207 ntBASIC21.5■■□□□ 1.03
TM4SF1P30408 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.5■■□□□ 1.03
TM4SF1P30408 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.5■■□□□ 1.03
TM4SF1P30408 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM4SF1P30408 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF1P30408 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.49■■□□□ 1.03
TM4SF1P30408 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF1P30408 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TM4SF1P30408 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.49■■□□□ 1.03
TM4SF1P30408 AP005018.1-201ENST00000525475 301 ntBASIC21.49■■□□□ 1.03
TM4SF1P30408 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.49■■□□□ 1.03
TM4SF1P30408 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.49■■□□□ 1.03
TM4SF1P30408 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.49■■□□□ 1.03
TM4SF1P30408 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.49■■□□□ 1.03
TM4SF1P30408 AL161645.1-201ENST00000622716 1255 ntBASIC21.49■■□□□ 1.03
TM4SF1P30408 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.49■■□□□ 1.03
TM4SF1P30408 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.49■■□□□ 1.03
TM4SF1P30408 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.49■■□□□ 1.03
TM4SF1P30408 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.49■■□□□ 1.03
TM4SF1P30408 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.48■■□□□ 1.03
TM4SF1P30408 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF1P30408 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF1P30408 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.48■■□□□ 1.03
TM4SF1P30408 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF1P30408 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF1P30408 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF1P30408 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.48■■□□□ 1.03
TM4SF1P30408 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.48■■□□□ 1.03
TM4SF1P30408 AC097493.3-201ENST00000509725 367 ntBASIC21.48■■□□□ 1.03
TM4SF1P30408 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.48■■□□□ 1.03
TM4SF1P30408 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.48■■□□□ 1.03
TM4SF1P30408 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF1P30408 AL158211.3-201ENST00000607385 239 ntBASIC21.48■■□□□ 1.03
TM4SF1P30408 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.48■■□□□ 1.03
TM4SF1P30408 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF1P30408 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.48■■□□□ 1.03
TM4SF1P30408 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TM4SF1P30408 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TM4SF1P30408 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms