Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.29■□□□□ 0.2
NR4A1P22736 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.28■□□□□ 0.2
NR4A1P22736 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 LINC01126-201ENST00000623515 1646 ntBASIC16.28■□□□□ 0.2
NR4A1P22736 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.28■□□□□ 0.2
NR4A1P22736 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
NR4A1P22736 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.28■□□□□ 0.2
NR4A1P22736 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 AL138688.1-201ENST00000624851 1594 ntBASIC16.28■□□□□ 0.2
NR4A1P22736 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NR4A1P22736 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR4A1P22736 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
NR4A1P22736 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NR4A1P22736 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NR4A1P22736 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
NR4A1P22736 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.27■□□□□ 0.2
NR4A1P22736 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.27■□□□□ 0.2
NR4A1P22736 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.27■□□□□ 0.2
NR4A1P22736 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR4A1P22736 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR4A1P22736 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.27■□□□□ 0.19
NR4A1P22736 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR4A1P22736 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.27■□□□□ 0.19
NR4A1P22736 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR4A1P22736 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.27■□□□□ 0.19
NR4A1P22736 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NR4A1P22736 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR4A1P22736 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.27■□□□□ 0.19
NR4A1P22736 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NR4A1P22736 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NR4A1P22736 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.27■□□□□ 0.19
NR4A1P22736 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.27■□□□□ 0.19
NR4A1P22736 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR4A1P22736 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms