Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB4AP20338 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
RAB4AP20338 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB4AP20338 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB4AP20338 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RAB4AP20338 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB4AP20338 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB4AP20338 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB4AP20338 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB4AP20338 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB4AP20338 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB4AP20338 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB4AP20338 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RAB4AP20338 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB4AP20338 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB4AP20338 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB4AP20338 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.42□□□□□ -0.26
RAB4AP20338 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.42□□□□□ -0.26
RAB4AP20338 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.42□□□□□ -0.26
RAB4AP20338 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.42□□□□□ -0.26
RAB4AP20338 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB4AP20338 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RAB4AP20338 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RAB4AP20338 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB4AP20338 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RAB4AP20338 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB4AP20338 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RAB4AP20338 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RAB4AP20338 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB4AP20338 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RAB4AP20338 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB4AP20338 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB4AP20338 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 AC106886.4-201ENST00000623557 2502 ntBASIC13.41□□□□□ -0.26
RAB4AP20338 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB4AP20338 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RAB4AP20338 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RAB4AP20338 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB4AP20338 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RAB4AP20338 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.41□□□□□ -0.26
RAB4AP20338 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB4AP20338 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.41□□□□□ -0.26
RAB4AP20338 HLA-A-209ENST00000638375 975 ntBASIC13.41□□□□□ -0.26
RAB4AP20338 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 AL096828.2-201ENST00000567259 1965 ntBASIC13.41□□□□□ -0.26
RAB4AP20338 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB4AP20338 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RAB4AP20338 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RAB4AP20338 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms