Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFRSF1BP20333 AL353692.3-201ENST00000407031 1396 ntBASIC16.26■□□□□ 0.19
TNFRSF1BP20333 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 CROCCP1-201ENST00000426910 5675 ntBASIC16.25■□□□□ 0.19
TNFRSF1BP20333 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 AC068472.1-201ENST00000474589 881 ntBASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 PCDH8P1-201ENST00000428983 2773 ntBASIC16.25■□□□□ 0.19
TNFRSF1BP20333 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF1BP20333 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 SLC25A1P3-201ENST00000395415 828 ntBASIC16.24■□□□□ 0.19
TNFRSF1BP20333 STARP1-201ENST00000397973 869 ntBASIC16.24■□□□□ 0.19
TNFRSF1BP20333 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 KRT18P38-201ENST00000449496 1282 ntBASIC16.24■□□□□ 0.19
TNFRSF1BP20333 YBX1P2-201ENST00000489612 999 ntBASIC16.24■□□□□ 0.19
TNFRSF1BP20333 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 ZNF444P1-201ENST00000559497 298 ntBASIC16.24■□□□□ 0.19
TNFRSF1BP20333 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.24■□□□□ 0.19
TNFRSF1BP20333 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 AC010460.3-201ENST00000511359 1579 ntBASIC16.24■□□□□ 0.19
TNFRSF1BP20333 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF1BP20333 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms