Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.46■□□□□ 0.39
XRCC1P18887 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
XRCC1P18887 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
XRCC1P18887 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.46■□□□□ 0.39
XRCC1P18887 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.45■□□□□ 0.38
XRCC1P18887 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
XRCC1P18887 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
XRCC1P18887 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
XRCC1P18887 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.45■□□□□ 0.38
XRCC1P18887 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
XRCC1P18887 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.45■□□□□ 0.38
XRCC1P18887 EMBP1-201ENST00000458200 901 ntBASIC17.45■□□□□ 0.38
XRCC1P18887 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
XRCC1P18887 AC114341.1-201ENST00000618070 349 ntBASIC17.45■□□□□ 0.38
XRCC1P18887 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.45■□□□□ 0.38
XRCC1P18887 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XRCC1P18887 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
XRCC1P18887 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.44■□□□□ 0.38
XRCC1P18887 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.44■□□□□ 0.38
XRCC1P18887 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 TP73-AS1-210ENST00000637775 1455 ntBASIC17.44■□□□□ 0.38
XRCC1P18887 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.44■□□□□ 0.38
XRCC1P18887 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.44■□□□□ 0.38
XRCC1P18887 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.44■□□□□ 0.38
XRCC1P18887 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.44■□□□□ 0.38
XRCC1P18887 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.44■□□□□ 0.38
XRCC1P18887 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 AC026396.1-201ENST00000419388 421 ntBASIC17.44■□□□□ 0.38
XRCC1P18887 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.44■□□□□ 0.38
XRCC1P18887 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.44■□□□□ 0.38
XRCC1P18887 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.44■□□□□ 0.38
XRCC1P18887 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
XRCC1P18887 AC096582.2-201ENST00000510860 516 ntBASIC17.44■□□□□ 0.38
XRCC1P18887 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 AL591684.3-201ENST00000605187 298 ntBASIC17.44■□□□□ 0.38
XRCC1P18887 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.44■□□□□ 0.38
XRCC1P18887 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.44■□□□□ 0.38
XRCC1P18887 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
XRCC1P18887 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.44■□□□□ 0.38
XRCC1P18887 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XRCC1P18887 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
XRCC1P18887 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.43■□□□□ 0.38
XRCC1P18887 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.43■□□□□ 0.38
XRCC1P18887 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.43■□□□□ 0.38
XRCC1P18887 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.43■□□□□ 0.38
XRCC1P18887 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.43■□□□□ 0.38
XRCC1P18887 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XRCC1P18887 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.43■□□□□ 0.38
XRCC1P18887 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.43■□□□□ 0.38
XRCC1P18887 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.43■□□□□ 0.38
XRCC1P18887 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms