Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DOBP13765 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DOBP13765 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 UPK3BP1-201ENST00000428678 509 ntBASIC15.68■□□□□ 0.1
HLA-DOBP13765 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DOBP13765 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 AC096582.2-201ENST00000510860 516 ntBASIC15.68■□□□□ 0.1
HLA-DOBP13765 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DOBP13765 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DOBP13765 AC011467.2-201ENST00000598425 242 ntBASIC15.68■□□□□ 0.1
HLA-DOBP13765 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DOBP13765 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DOBP13765 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 KRT8P10-201ENST00000450021 1447 ntBASIC15.68■□□□□ 0.1
HLA-DOBP13765 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DOBP13765 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 AC104819.1-201ENST00000504587 486 ntBASIC15.67■□□□□ 0.1
HLA-DOBP13765 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DOBP13765 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DOBP13765 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 AP001094.4-201ENST00000579008 2176 ntBASIC15.66■□□□□ 0.1
HLA-DOBP13765 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 RCN1P2-201ENST00000398357 915 ntBASIC15.66■□□□□ 0.1
HLA-DOBP13765 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DOBP13765 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DOBP13765 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms