Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 AC148477.5-201ENST00000625164 1645 ntBASIC13.67□□□□□ -0.22
CD28P10747 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CD28P10747 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 AL353593.2-201ENST00000602529 1483 ntBASIC13.67□□□□□ -0.22
CD28P10747 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CD28P10747 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD28P10747 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.66□□□□□ -0.22
CD28P10747 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.66□□□□□ -0.22
CD28P10747 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD28P10747 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.66□□□□□ -0.22
CD28P10747 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.66□□□□□ -0.22
CD28P10747 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.66□□□□□ -0.22
CD28P10747 AC108751.1-201ENST00000490852 363 ntBASIC13.66□□□□□ -0.22
CD28P10747 AC040169.1-201ENST00000565382 521 ntBASIC13.66□□□□□ -0.22
CD28P10747 AC109462.3-201ENST00000573934 613 ntBASIC13.66□□□□□ -0.22
CD28P10747 AL589182.2-201ENST00000619332 1049 ntBASIC13.66□□□□□ -0.22
CD28P10747 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.66□□□□□ -0.22
CD28P10747 AC055717.3-201ENST00000622967 595 ntBASIC13.66□□□□□ -0.22
CD28P10747 PGM5P2-202ENST00000637225 1043 ntBASIC13.66□□□□□ -0.22
CD28P10747 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD28P10747 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CD28P10747 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.66□□□□□ -0.22
CD28P10747 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 REXO1L9P-201ENST00000604264 2108 ntBASIC13.66□□□□□ -0.22
CD28P10747 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.66□□□□□ -0.22
CD28P10747 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD28P10747 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CD28P10747 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD28P10747 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.65□□□□□ -0.22
CD28P10747 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD28P10747 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.65□□□□□ -0.22
CD28P10747 LETM1P2-201ENST00000597330 2178 ntBASIC13.65□□□□□ -0.22
CD28P10747 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.65□□□□□ -0.22
CD28P10747 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 AC009949.1-201ENST00000623048 1830 ntBASIC13.65□□□□□ -0.22
CD28P10747 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.65□□□□□ -0.22
CD28P10747 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 AC023274.1-201ENST00000418278 595 ntBASIC13.65□□□□□ -0.22
CD28P10747 UPF3AP3-201ENST00000420996 769 ntBASIC13.65□□□□□ -0.22
CD28P10747 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.65□□□□□ -0.22
CD28P10747 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.65□□□□□ -0.22
CD28P10747 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.65□□□□□ -0.22
CD28P10747 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.65□□□□□ -0.22
CD28P10747 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.65□□□□□ -0.22
CD28P10747 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.65□□□□□ -0.22
CD28P10747 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.65□□□□□ -0.22
CD28P10747 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.65□□□□□ -0.22
CD28P10747 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD28P10747 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.65□□□□□ -0.22
CD28P10747 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD28P10747 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.65□□□□□ -0.22
CD28P10747 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD28P10747 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD28P10747 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms