Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.35■□□□□ 0.53
RARAP10276 AC106886.4-201ENST00000623557 2502 ntBASIC18.34■□□□□ 0.53
RARAP10276 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.34■□□□□ 0.53
RARAP10276 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.34■□□□□ 0.53
RARAP10276 AC016396.2-201ENST00000562575 1417 ntBASIC18.34■□□□□ 0.53
RARAP10276 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.34■□□□□ 0.53
RARAP10276 IER3-202ENST00000376377 1350 ntBASIC18.34■□□□□ 0.53
RARAP10276 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.34■□□□□ 0.53
RARAP10276 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RARAP10276 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.34■□□□□ 0.53
RARAP10276 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
RARAP10276 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.34■□□□□ 0.53
RARAP10276 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.34■□□□□ 0.53
RARAP10276 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.34■□□□□ 0.53
RARAP10276 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RARAP10276 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.34■□□□□ 0.53
RARAP10276 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.34■□□□□ 0.53
RARAP10276 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 AL118508.1-201ENST00000613502 2345 ntBASIC18.34■□□□□ 0.53
RARAP10276 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RARAP10276 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RARAP10276 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.34■□□□□ 0.53
RARAP10276 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RARAP10276 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RARAP10276 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RARAP10276 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RARAP10276 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RARAP10276 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RARAP10276 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RARAP10276 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RARAP10276 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RARAP10276 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RARAP10276 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RARAP10276 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.33■□□□□ 0.52
RARAP10276 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.33■□□□□ 0.52
RARAP10276 AC246785.2-201ENST00000432512 513 ntBASIC18.33■□□□□ 0.52
RARAP10276 TSSC2-201ENST00000450217 709 ntBASIC18.33■□□□□ 0.52
RARAP10276 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.33■□□□□ 0.52
RARAP10276 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.33■□□□□ 0.52
RARAP10276 KRT18P35-201ENST00000510488 1269 ntBASIC18.33■□□□□ 0.52
RARAP10276 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.33■□□□□ 0.52
RARAP10276 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RARAP10276 AP005901.3-202ENST00000581653 237 ntBASIC18.33■□□□□ 0.52
RARAP10276 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RARAP10276 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.33■□□□□ 0.52
RARAP10276 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.33■□□□□ 0.52
RARAP10276 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RARAP10276 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RARAP10276 AC060834.1-201ENST00000443027 2032 ntBASIC18.33■□□□□ 0.52
RARAP10276 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RARAP10276 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RARAP10276 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RARAP10276 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RARAP10276 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RARAP10276 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RARAP10276 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.32■□□□□ 0.52
RARAP10276 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.32■□□□□ 0.52
RARAP10276 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RARAP10276 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RARAP10276 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.32■□□□□ 0.52
RARAP10276 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.32■□□□□ 0.52
RARAP10276 AP002383.4-201ENST00000442518 975 ntBASIC18.32■□□□□ 0.52
RARAP10276 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.32■□□□□ 0.52
RARAP10276 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.32■□□□□ 0.52
RARAP10276 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.32■□□□□ 0.52
RARAP10276 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RARAP10276 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RARAP10276 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.32■□□□□ 0.52
RARAP10276 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RARAP10276 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.31■□□□□ 0.52
RARAP10276 KRT18P1-202ENST00000452408 1331 ntBASIC18.31■□□□□ 0.52
RARAP10276 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms