Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC175P0C221 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC175P0C221 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CCDC175P0C221 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC175P0C221 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
CCDC175P0C221 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC175P0C221 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC175P0C221 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CCDC175P0C221 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC175P0C221 RNF216P1-203ENST00000404404 2427 ntBASIC18.89■□□□□ 0.61
CCDC175P0C221 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC175P0C221 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC175P0C221 AC233702.5-201ENST00000584107 538 ntBASIC18.89■□□□□ 0.61
CCDC175P0C221 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 AC092053.1-201ENST00000605787 1936 ntBASIC18.89■□□□□ 0.61
CCDC175P0C221 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC175P0C221 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CCDC175P0C221 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC175P0C221 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC175P0C221 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC175P0C221 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC175P0C221 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC175P0C221 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC175P0C221 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC175P0C221 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
CCDC175P0C221 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC175P0C221 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC175P0C221 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC175P0C221 AC009947.2-201ENST00000444014 672 ntBASIC18.88■□□□□ 0.61
CCDC175P0C221 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC175P0C221 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC175P0C221 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 LINC02199-201ENST00000506655 2702 ntBASIC18.88■□□□□ 0.61
CCDC175P0C221 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC175P0C221 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC175P0C221 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC175P0C221 AC008741.2-201ENST00000612792 3115 ntBASIC18.88■□□□□ 0.61
CCDC175P0C221 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC175P0C221 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC175P0C221 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC175P0C221 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CCDC175P0C221 AC093525.9-201ENST00000624961 1746 ntBASIC18.88■□□□□ 0.61
CCDC175P0C221 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC175P0C221 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC175P0C221 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 AC078925.2-201ENST00000624013 1973 ntBASIC18.88■□□□□ 0.61
CCDC175P0C221 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC175P0C221 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC175P0C221 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC175P0C221 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC175P0C221 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC175P0C221 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC175P0C221 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC175P0C221 SLC25A1P3-201ENST00000395415 828 ntBASIC18.87■□□□□ 0.61
CCDC175P0C221 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC175P0C221 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 RBM17P1-201ENST00000453646 1190 ntBASIC18.87■□□□□ 0.61
CCDC175P0C221 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC175P0C221 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC175P0C221 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC175P0C221 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC175P0C221 AP003071.4-201ENST00000562276 1284 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms