Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC1P07992 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC1P07992 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.53■□□□□ 0.08
ERCC1P07992 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.53■□□□□ 0.08
ERCC1P07992 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
ERCC1P07992 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.53■□□□□ 0.08
ERCC1P07992 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.53■□□□□ 0.08
ERCC1P07992 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.53■□□□□ 0.08
ERCC1P07992 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ERCC1P07992 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC1P07992 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ERCC1P07992 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.52■□□□□ 0.08
ERCC1P07992 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 DRAXINP1-201ENST00000437611 948 ntBASIC15.52■□□□□ 0.08
ERCC1P07992 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ERCC1P07992 AC104819.1-201ENST00000504587 486 ntBASIC15.52■□□□□ 0.08
ERCC1P07992 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.52■□□□□ 0.08
ERCC1P07992 AP000867.3-201ENST00000524675 377 ntBASIC15.52■□□□□ 0.08
ERCC1P07992 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.52■□□□□ 0.08
ERCC1P07992 AC111152.3-201ENST00000569699 673 ntBASIC15.52■□□□□ 0.08
ERCC1P07992 RNF126P1-202ENST00000569893 925 ntBASIC15.52■□□□□ 0.08
ERCC1P07992 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.52■□□□□ 0.08
ERCC1P07992 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.52■□□□□ 0.08
ERCC1P07992 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC1P07992 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ERCC1P07992 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.52■□□□□ 0.07
ERCC1P07992 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.52■□□□□ 0.07
ERCC1P07992 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC1P07992 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
ERCC1P07992 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC1P07992 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC1P07992 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC1P07992 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
ERCC1P07992 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
ERCC1P07992 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC1P07992 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC1P07992 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.52■□□□□ 0.07
ERCC1P07992 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC1P07992 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ERCC1P07992 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC1P07992 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.51■□□□□ 0.07
ERCC1P07992 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
ERCC1P07992 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.51■□□□□ 0.07
ERCC1P07992 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC1P07992 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.51■□□□□ 0.07
ERCC1P07992 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC1P07992 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.51■□□□□ 0.07
ERCC1P07992 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC1P07992 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.51■□□□□ 0.07
ERCC1P07992 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.51■□□□□ 0.07
ERCC1P07992 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.51■□□□□ 0.07
ERCC1P07992 AC012615.1-201ENST00000565797 1299 ntBASIC15.51■□□□□ 0.07
ERCC1P07992 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.51■□□□□ 0.07
ERCC1P07992 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 AL121772.3-201ENST00000610840 674 ntBASIC15.51■□□□□ 0.07
ERCC1P07992 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
ERCC1P07992 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC1P07992 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ERCC1P07992 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms