Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSBP07858 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CTSBP07858 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CTSBP07858 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 PTCHD3P3-201ENST00000403073 906 ntBASIC16.51■□□□□ 0.23
CTSBP07858 AC007967.2-201ENST00000432613 625 ntBASIC16.51■□□□□ 0.23
CTSBP07858 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CTSBP07858 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSBP07858 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.51■□□□□ 0.23
CTSBP07858 AC140113.2-201ENST00000604370 208 ntBASIC16.51■□□□□ 0.23
CTSBP07858 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CTSBP07858 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSBP07858 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CTSBP07858 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSBP07858 ZNF259P1-201ENST00000407656 1365 ntBASIC16.51■□□□□ 0.23
CTSBP07858 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.51■□□□□ 0.23
CTSBP07858 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CTSBP07858 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSBP07858 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 PP12613-201ENST00000424958 2230 ntBASIC16.5■□□□□ 0.23
CTSBP07858 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSBP07858 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.5■□□□□ 0.23
CTSBP07858 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.5■□□□□ 0.23
CTSBP07858 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSBP07858 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 RPS15P9-201ENST00000494093 319 ntBASIC16.5■□□□□ 0.23
CTSBP07858 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
CTSBP07858 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSBP07858 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.5■□□□□ 0.23
CTSBP07858 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.5■□□□□ 0.23
CTSBP07858 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 MIR1199-201ENST00000621445 119 ntBASIC16.5■□□□□ 0.23
CTSBP07858 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSBP07858 AC005593.1-201ENST00000624894 515 ntBASIC16.5■□□□□ 0.23
CTSBP07858 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CTSBP07858 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.5■□□□□ 0.23
CTSBP07858 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CTSBP07858 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.5■□□□□ 0.23
CTSBP07858 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.5■□□□□ 0.23
CTSBP07858 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CTSBP07858 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSBP07858 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSBP07858 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.49■□□□□ 0.23
CTSBP07858 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CTSBP07858 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.49■□□□□ 0.23
CTSBP07858 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CTSBP07858 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.49■□□□□ 0.23
CTSBP07858 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTSBP07858 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.49■□□□□ 0.23
CTSBP07858 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.49■□□□□ 0.23
CTSBP07858 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 PMS2P1-201ENST00000431037 1228 ntBASIC16.49■□□□□ 0.23
CTSBP07858 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 AC108751.1-201ENST00000490852 363 ntBASIC16.49■□□□□ 0.23
CTSBP07858 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.49■□□□□ 0.23
CTSBP07858 KRT18P58-201ENST00000527480 1120 ntBASIC16.49■□□□□ 0.23
CTSBP07858 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.49■□□□□ 0.23
CTSBP07858 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.49■□□□□ 0.23
CTSBP07858 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms