Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TOMM40O96008 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TOMM40O96008 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TOMM40O96008 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.73□□□□□ -0.21
TOMM40O96008 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TOMM40O96008 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TOMM40O96008 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TOMM40O96008 AC016396.2-201ENST00000562575 1417 ntBASIC13.73□□□□□ -0.21
TOMM40O96008 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TOMM40O96008 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TOMM40O96008 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TOMM40O96008 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.72□□□□□ -0.21
TOMM40O96008 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.72□□□□□ -0.21
TOMM40O96008 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TOMM40O96008 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.72□□□□□ -0.21
TOMM40O96008 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 AC113347.1-201ENST00000413321 391 ntBASIC13.72□□□□□ -0.21
TOMM40O96008 AL137013.1-201ENST00000432946 1228 ntBASIC13.72□□□□□ -0.21
TOMM40O96008 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.72□□□□□ -0.21
TOMM40O96008 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.72□□□□□ -0.21
TOMM40O96008 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.72□□□□□ -0.21
TOMM40O96008 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TOMM40O96008 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.72□□□□□ -0.21
TOMM40O96008 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.72□□□□□ -0.21
TOMM40O96008 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.72□□□□□ -0.21
TOMM40O96008 AC005363.2-201ENST00000618631 242 ntBASIC13.72□□□□□ -0.21
TOMM40O96008 AC011558.1-201ENST00000623459 338 ntBASIC13.72□□□□□ -0.21
TOMM40O96008 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.72□□□□□ -0.21
TOMM40O96008 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TOMM40O96008 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.72□□□□□ -0.21
TOMM40O96008 C8orf49-201ENST00000525043 1968 ntBASIC13.72□□□□□ -0.21
TOMM40O96008 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
TOMM40O96008 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 AL136379.1-201ENST00000623471 2642 ntBASIC13.72□□□□□ -0.21
TOMM40O96008 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TOMM40O96008 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TOMM40O96008 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.71□□□□□ -0.21
TOMM40O96008 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.71□□□□□ -0.21
TOMM40O96008 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.71□□□□□ -0.21
TOMM40O96008 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.71□□□□□ -0.21
TOMM40O96008 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.71□□□□□ -0.21
TOMM40O96008 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.71□□□□□ -0.21
TOMM40O96008 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.71□□□□□ -0.21
TOMM40O96008 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.71□□□□□ -0.21
TOMM40O96008 YBX1P2-201ENST00000489612 999 ntBASIC13.71□□□□□ -0.21
TOMM40O96008 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.71□□□□□ -0.21
TOMM40O96008 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.71□□□□□ -0.21
TOMM40O96008 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.71□□□□□ -0.21
TOMM40O96008 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TOMM40O96008 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.71□□□□□ -0.21
TOMM40O96008 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.71□□□□□ -0.21
TOMM40O96008 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TOMM40O96008 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TOMM40O96008 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.71□□□□□ -0.22
TOMM40O96008 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
TOMM40O96008 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 AL353692.3-201ENST00000407031 1396 ntBASIC13.71□□□□□ -0.22
TOMM40O96008 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TOMM40O96008 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms