Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.17■□□□□ 0.34
CPNE6O95741 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.17■□□□□ 0.34
CPNE6O95741 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE6O95741 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE6O95741 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.17■□□□□ 0.34
CPNE6O95741 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE6O95741 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.17■□□□□ 0.34
CPNE6O95741 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CPNE6O95741 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.17■□□□□ 0.34
CPNE6O95741 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE6O95741 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CPNE6O95741 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE6O95741 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.16■□□□□ 0.34
CPNE6O95741 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 RPS2P1-201ENST00000434010 821 ntBASIC17.16■□□□□ 0.34
CPNE6O95741 AC007967.3-201ENST00000434308 558 ntBASIC17.16■□□□□ 0.34
CPNE6O95741 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE6O95741 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE6O95741 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE6O95741 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE6O95741 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE6O95741 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE6O95741 HLA-J-201ENST00000462773 1622 ntBASIC17.16■□□□□ 0.34
CPNE6O95741 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CPNE6O95741 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE6O95741 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE6O95741 AL139384.1-201ENST00000612143 3047 ntBASIC17.15■□□□□ 0.34
CPNE6O95741 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE6O95741 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
CPNE6O95741 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 AC138028.4-201ENST00000564984 1845 ntBASIC17.15■□□□□ 0.34
CPNE6O95741 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CPNE6O95741 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE6O95741 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE6O95741 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.15■□□□□ 0.34
CPNE6O95741 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 OR7E14P-202ENST00000530490 1290 ntBASIC17.15■□□□□ 0.34
CPNE6O95741 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE6O95741 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE6O95741 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE6O95741 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CPNE6O95741 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE6O95741 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE6O95741 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE6O95741 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CPNE6O95741 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE6O95741 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CPNE6O95741 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
CPNE6O95741 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CPNE6O95741 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPNE6O95741 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CPNE6O95741 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CPNE6O95741 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CPNE6O95741 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE6O95741 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CPNE6O95741 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPNE6O95741 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CPNE6O95741 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CPNE6O95741 AC096633.1-201ENST00000422446 749 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms