Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.62■□□□□ 0.09
CDRT1O95170 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 PKD1P5-201ENST00000532415 10291 ntBASIC15.62■□□□□ 0.09
CDRT1O95170 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 KRT18P23-201ENST00000435622 1283 ntBASIC15.62■□□□□ 0.09
CDRT1O95170 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.62■□□□□ 0.09
CDRT1O95170 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.62■□□□□ 0.09
CDRT1O95170 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
CDRT1O95170 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.62■□□□□ 0.09
CDRT1O95170 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CDRT1O95170 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDRT1O95170 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDRT1O95170 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 HOXB1-202ENST00000577092 1414 ntBASIC15.61■□□□□ 0.09
CDRT1O95170 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.61■□□□□ 0.09
CDRT1O95170 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.61■□□□□ 0.09
CDRT1O95170 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CDRT1O95170 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.61■□□□□ 0.09
CDRT1O95170 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.61■□□□□ 0.09
CDRT1O95170 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CDRT1O95170 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CDRT1O95170 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDRT1O95170 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 AL355355.2-201ENST00000442321 338 ntBASIC15.61■□□□□ 0.09
CDRT1O95170 AC098590.1-201ENST00000468126 897 ntBASIC15.61■□□□□ 0.09
CDRT1O95170 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.61■□□□□ 0.09
CDRT1O95170 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.61■□□□□ 0.09
CDRT1O95170 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.61■□□□□ 0.09
CDRT1O95170 AP001412.1-201ENST00000608405 714 ntBASIC15.61■□□□□ 0.09
CDRT1O95170 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CDRT1O95170 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.61■□□□□ 0.09
CDRT1O95170 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CDRT1O95170 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDRT1O95170 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDRT1O95170 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDRT1O95170 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.6■□□□□ 0.09
CDRT1O95170 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDRT1O95170 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDRT1O95170 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.6■□□□□ 0.09
CDRT1O95170 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDRT1O95170 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms