Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LGR5O75473 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.34■□□□□ 0.69
LGR5O75473 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.34■□□□□ 0.69
LGR5O75473 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.34■□□□□ 0.69
LGR5O75473 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.34■□□□□ 0.69
LGR5O75473 OR7E47P-204ENST00000575924 449 ntBASIC19.34■□□□□ 0.69
LGR5O75473 MIR4751-201ENST00000578027 74 ntBASIC19.34■□□□□ 0.69
LGR5O75473 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
LGR5O75473 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
LGR5O75473 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.34■□□□□ 0.69
LGR5O75473 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LGR5O75473 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.34■□□□□ 0.69
LGR5O75473 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.34■□□□□ 0.69
LGR5O75473 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
LGR5O75473 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LGR5O75473 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LGR5O75473 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LGR5O75473 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
LGR5O75473 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LGR5O75473 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.34■□□□□ 0.69
LGR5O75473 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.34■□□□□ 0.69
LGR5O75473 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LGR5O75473 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LGR5O75473 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LGR5O75473 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.33■□□□□ 0.69
LGR5O75473 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.33■□□□□ 0.69
LGR5O75473 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LGR5O75473 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
LGR5O75473 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LGR5O75473 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LGR5O75473 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LGR5O75473 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LGR5O75473 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.33■□□□□ 0.68
LGR5O75473 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
LGR5O75473 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LGR5O75473 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.33■□□□□ 0.68
LGR5O75473 MCCD1P2-201ENST00000423228 335 ntBASIC19.33■□□□□ 0.68
LGR5O75473 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.33■□□□□ 0.68
LGR5O75473 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.33■□□□□ 0.68
LGR5O75473 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.33■□□□□ 0.68
LGR5O75473 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.33■□□□□ 0.68
LGR5O75473 AC010654.1-201ENST00000615722 808 ntBASIC19.33■□□□□ 0.68
LGR5O75473 GGTLC5P-201ENST00000617623 998 ntBASIC19.33■□□□□ 0.68
LGR5O75473 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LGR5O75473 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.33■□□□□ 0.68
LGR5O75473 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LGR5O75473 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LGR5O75473 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.33■□□□□ 0.68
LGR5O75473 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.33■□□□□ 0.68
LGR5O75473 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LGR5O75473 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 MRPL20P1-201ENST00000400819 433 ntBASIC19.32■□□□□ 0.68
LGR5O75473 IGLL3P-201ENST00000412472 434 ntBASIC19.32■□□□□ 0.68
LGR5O75473 AP006288.1-201ENST00000446065 395 ntBASIC19.32■□□□□ 0.68
LGR5O75473 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.32■□□□□ 0.68
LGR5O75473 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.32■□□□□ 0.68
LGR5O75473 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LGR5O75473 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.32■□□□□ 0.68
LGR5O75473 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LGR5O75473 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.32■□□□□ 0.68
LGR5O75473 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LGR5O75473 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LGR5O75473 AC012317.2-201ENST00000623305 2251 ntBASIC19.31■□□□□ 0.68
LGR5O75473 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LGR5O75473 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LGR5O75473 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LGR5O75473 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LGR5O75473 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LGR5O75473 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LGR5O75473 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms