Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF253O75346 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ZNF253O75346 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ZNF253O75346 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 AC132938.6-201ENST00000623828 1655 ntBASIC13.66□□□□□ -0.22
ZNF253O75346 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
ZNF253O75346 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF253O75346 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ZNF253O75346 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF253O75346 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ZNF253O75346 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 MIR4785-201ENST00000585005 73 ntBASIC13.66□□□□□ -0.22
ZNF253O75346 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZNF253O75346 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ZNF253O75346 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZNF253O75346 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ZNF253O75346 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ZNF253O75346 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF253O75346 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF253O75346 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF253O75346 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ZNF253O75346 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZNF253O75346 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ZNF253O75346 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 PCDHA14-201ENST00000506751 2298 ntBASIC13.65□□□□□ -0.22
ZNF253O75346 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF253O75346 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ZNF253O75346 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.65□□□□□ -0.22
ZNF253O75346 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.65□□□□□ -0.22
ZNF253O75346 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
ZNF253O75346 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF253O75346 AC105020.1-201ENST00000435356 2205 ntBASIC13.65□□□□□ -0.22
ZNF253O75346 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF253O75346 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ZNF253O75346 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 AC099343.3-201ENST00000605834 2503 ntBASIC13.65□□□□□ -0.22
ZNF253O75346 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ZNF253O75346 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF253O75346 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
ZNF253O75346 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF253O75346 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
ZNF253O75346 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
ZNF253O75346 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ZNF253O75346 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms