Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PFDN1O60925 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 KRT8P45-201ENST00000414328 1447 ntBASIC15.6■□□□□ 0.09
PFDN1O60925 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.6■□□□□ 0.09
PFDN1O60925 AC013268.4-201ENST00000637413 2228 ntBASIC15.6■□□□□ 0.09
PFDN1O60925 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.6■□□□□ 0.09
PFDN1O60925 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 PHGDH-209ENST00000641074 1780 ntBASIC15.6■□□□□ 0.09
PFDN1O60925 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PFDN1O60925 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.6■□□□□ 0.09
PFDN1O60925 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.6■□□□□ 0.09
PFDN1O60925 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.6■□□□□ 0.09
PFDN1O60925 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.6■□□□□ 0.09
PFDN1O60925 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PFDN1O60925 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
PFDN1O60925 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.6■□□□□ 0.09
PFDN1O60925 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.6■□□□□ 0.09
PFDN1O60925 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.6■□□□□ 0.09
PFDN1O60925 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.6■□□□□ 0.09
PFDN1O60925 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PFDN1O60925 AC087633.2-202ENST00000565166 1439 ntBASIC15.6■□□□□ 0.09
PFDN1O60925 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PFDN1O60925 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 AC106881.1-201ENST00000605849 3329 ntBASIC15.59■□□□□ 0.09
PFDN1O60925 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.59■□□□□ 0.09
PFDN1O60925 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 AC105233.4-201ENST00000642045 216 ntBASIC15.59■□□□□ 0.09
PFDN1O60925 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PFDN1O60925 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
PFDN1O60925 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PFDN1O60925 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PFDN1O60925 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.58■□□□□ 0.09
PFDN1O60925 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.58■□□□□ 0.09
PFDN1O60925 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PFDN1O60925 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PFDN1O60925 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PFDN1O60925 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PFDN1O60925 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
PFDN1O60925 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.58■□□□□ 0.09
PFDN1O60925 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.58■□□□□ 0.09
PFDN1O60925 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PFDN1O60925 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.58■□□□□ 0.08
PFDN1O60925 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PFDN1O60925 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
PFDN1O60925 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PFDN1O60925 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
PFDN1O60925 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms