Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CACNA1FO60840 AC141586.5-201ENST00000624546 2050 ntBASIC21.79■■□□□ 1.08
CACNA1FO60840 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.79■■□□□ 1.08
CACNA1FO60840 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.79■■□□□ 1.08
CACNA1FO60840 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.79■■□□□ 1.08
CACNA1FO60840 OR7E47P-204ENST00000575924 449 ntBASIC21.79■■□□□ 1.08
CACNA1FO60840 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CACNA1FO60840 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CACNA1FO60840 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.79■■□□□ 1.08
CACNA1FO60840 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.79■■□□□ 1.08
CACNA1FO60840 AL121761.2-201ENST00000598007 1648 ntBASIC21.79■■□□□ 1.08
CACNA1FO60840 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CACNA1FO60840 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CACNA1FO60840 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CACNA1FO60840 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CACNA1FO60840 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.78■■□□□ 1.08
CACNA1FO60840 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CACNA1FO60840 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CACNA1FO60840 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA1FO60840 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.78■■□□□ 1.08
CACNA1FO60840 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.78■■□□□ 1.08
CACNA1FO60840 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.78■■□□□ 1.08
CACNA1FO60840 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CACNA1FO60840 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.78■■□□□ 1.08
CACNA1FO60840 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA1FO60840 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA1FO60840 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA1FO60840 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA1FO60840 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.78■■□□□ 1.08
CACNA1FO60840 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA1FO60840 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.78■■□□□ 1.08
CACNA1FO60840 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.78■■□□□ 1.08
CACNA1FO60840 PRSS29P-201ENST00000440800 595 ntBASIC21.78■■□□□ 1.08
CACNA1FO60840 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.78■■□□□ 1.08
CACNA1FO60840 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.78■■□□□ 1.08
CACNA1FO60840 AC010327.4-202ENST00000591484 748 ntBASIC21.78■■□□□ 1.08
CACNA1FO60840 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.78■■□□□ 1.08
CACNA1FO60840 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 AC139713.2-201ENST00000641328 2723 ntBASIC21.77■■□□□ 1.08
CACNA1FO60840 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
CACNA1FO60840 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.77■■□□□ 1.08
CACNA1FO60840 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.77■■□□□ 1.08
CACNA1FO60840 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.77■■□□□ 1.08
CACNA1FO60840 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.77■■□□□ 1.08
CACNA1FO60840 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
CACNA1FO60840 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.77■■□□□ 1.08
CACNA1FO60840 RNA5SP416-201ENST00000516838 111 ntBASIC21.77■■□□□ 1.08
CACNA1FO60840 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.77■■□□□ 1.08
CACNA1FO60840 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA1FO60840 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CACNA1FO60840 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.76■■□□□ 1.07
CACNA1FO60840 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 PTCHD3P3-201ENST00000403073 906 ntBASIC21.76■■□□□ 1.07
CACNA1FO60840 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.76■■□□□ 1.07
CACNA1FO60840 IGLL3P-201ENST00000412472 434 ntBASIC21.76■■□□□ 1.07
CACNA1FO60840 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 AC040169.1-201ENST00000565382 521 ntBASIC21.76■■□□□ 1.07
CACNA1FO60840 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 AC004790.2-201ENST00000623588 572 ntBASIC21.76■■□□□ 1.07
CACNA1FO60840 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 AC018470.1-201ENST00000624790 3129 ntBASIC21.76■■□□□ 1.07
CACNA1FO60840 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.76■■□□□ 1.07
CACNA1FO60840 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA1FO60840 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.76■■□□□ 1.07
CACNA1FO60840 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.76■■□□□ 1.07
CACNA1FO60840 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.76■■□□□ 1.07
CACNA1FO60840 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.76■■□□□ 1.07
CACNA1FO60840 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA1FO60840 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA1FO60840 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.75■■□□□ 1.07
CACNA1FO60840 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA1FO60840 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.75■■□□□ 1.07
CACNA1FO60840 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
CACNA1FO60840 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CACNA1FO60840 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CACNA1FO60840 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA1FO60840 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CACNA1FO60840 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA1FO60840 YBX2P1-201ENST00000394192 760 ntBASIC21.75■■□□□ 1.07
CACNA1FO60840 KRT18P2-201ENST00000447938 1258 ntBASIC21.75■■□□□ 1.07
CACNA1FO60840 AC068137.2-201ENST00000605408 478 ntBASIC21.75■■□□□ 1.07
CACNA1FO60840 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA1FO60840 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.74■■□□□ 1.07
CACNA1FO60840 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms