Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TSPAN3O60637 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
TSPAN3O60637 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.01■□□□□ 0.47
TSPAN3O60637 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.01■□□□□ 0.47
TSPAN3O60637 AC098831.1-202ENST00000438821 336 ntBASIC18.01■□□□□ 0.47
TSPAN3O60637 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.01■□□□□ 0.47
TSPAN3O60637 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.01■□□□□ 0.47
TSPAN3O60637 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.01■□□□□ 0.47
TSPAN3O60637 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TSPAN3O60637 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.01■□□□□ 0.47
TSPAN3O60637 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TSPAN3O60637 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.01■□□□□ 0.47
TSPAN3O60637 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TSPAN3O60637 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.01■□□□□ 0.47
TSPAN3O60637 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TSPAN3O60637 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TSPAN3O60637 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 PKD1P1-201ENST00000458669 6805 ntBASIC18.01■□□□□ 0.47
TSPAN3O60637 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TSPAN3O60637 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 NOC2LP1-202ENST00000452600 2235 ntBASIC18■□□□□ 0.47
TSPAN3O60637 AC005332.8-201ENST00000622750 2735 ntBASIC18■□□□□ 0.47
TSPAN3O60637 AC009336.1-201ENST00000608941 1553 ntBASIC18■□□□□ 0.47
TSPAN3O60637 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18■□□□□ 0.47
TSPAN3O60637 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18■□□□□ 0.47
TSPAN3O60637 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 LAGE3P1-201ENST00000425356 484 ntBASIC18■□□□□ 0.47
TSPAN3O60637 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TSPAN3O60637 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18■□□□□ 0.47
TSPAN3O60637 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18■□□□□ 0.47
TSPAN3O60637 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18■□□□□ 0.47
TSPAN3O60637 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 AL671883.3-201ENST00000603274 991 ntBASIC18■□□□□ 0.47
TSPAN3O60637 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18■□□□□ 0.47
TSPAN3O60637 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TSPAN3O60637 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18■□□□□ 0.47
TSPAN3O60637 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TSPAN3O60637 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
TSPAN3O60637 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TSPAN3O60637 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TSPAN3O60637 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.99■□□□□ 0.47
TSPAN3O60637 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.99■□□□□ 0.47
TSPAN3O60637 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 AC005104.2-201ENST00000427818 678 ntBASIC17.99■□□□□ 0.47
TSPAN3O60637 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.99■□□□□ 0.47
TSPAN3O60637 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.99■□□□□ 0.47
TSPAN3O60637 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.99■□□□□ 0.47
TSPAN3O60637 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.99■□□□□ 0.47
TSPAN3O60637 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.99■□□□□ 0.47
TSPAN3O60637 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.99■□□□□ 0.47
TSPAN3O60637 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TSPAN3O60637 OR6D1P-202ENST00000641007 5290 ntBASIC17.99■□□□□ 0.47
TSPAN3O60637 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms