Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PCDHGA12O60330 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PCDHGA12O60330 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHGA12O60330 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 AC132938.6-201ENST00000623828 1655 ntBASIC17.33■□□□□ 0.37
PCDHGA12O60330 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PCDHGA12O60330 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.33■□□□□ 0.37
PCDHGA12O60330 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA12O60330 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA12O60330 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 SPDYE21P-201ENST00000413323 827 ntBASIC17.33■□□□□ 0.36
PCDHGA12O60330 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA12O60330 AC211486.1-202ENST00000416371 468 ntBASIC17.33■□□□□ 0.36
PCDHGA12O60330 MCCD1P2-201ENST00000423228 335 ntBASIC17.33■□□□□ 0.36
PCDHGA12O60330 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 AC211476.1-201ENST00000503899 468 ntBASIC17.33■□□□□ 0.36
PCDHGA12O60330 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 AL589182.2-201ENST00000619332 1049 ntBASIC17.33■□□□□ 0.36
PCDHGA12O60330 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA12O60330 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA12O60330 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGA12O60330 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA12O60330 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA12O60330 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 AC010460.3-201ENST00000511359 1579 ntBASIC17.31■□□□□ 0.36
PCDHGA12O60330 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms