Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 SAPCD2P3-201ENST00000455031 850 ntBASIC16.71■□□□□ 0.27
LCMT2O60294 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.71■□□□□ 0.27
LCMT2O60294 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 AC008608.2-201ENST00000606089 416 ntBASIC16.71■□□□□ 0.27
LCMT2O60294 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LCMT2O60294 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.71■□□□□ 0.27
LCMT2O60294 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.71■□□□□ 0.27
LCMT2O60294 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.71■□□□□ 0.27
LCMT2O60294 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCMT2O60294 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.71■□□□□ 0.27
LCMT2O60294 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
LCMT2O60294 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.71■□□□□ 0.26
LCMT2O60294 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
LCMT2O60294 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
LCMT2O60294 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.7■□□□□ 0.26
LCMT2O60294 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
LCMT2O60294 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 AL645608.8-201ENST00000606034 2086 ntBASIC16.7■□□□□ 0.26
LCMT2O60294 AC020916.1-201ENST00000587762 1774 ntBASIC16.7■□□□□ 0.26
LCMT2O60294 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.7■□□□□ 0.26
LCMT2O60294 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.7■□□□□ 0.26
LCMT2O60294 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.7■□□□□ 0.26
LCMT2O60294 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.7■□□□□ 0.26
LCMT2O60294 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.7■□□□□ 0.26
LCMT2O60294 RBM17P3-201ENST00000417687 1192 ntBASIC16.7■□□□□ 0.26
LCMT2O60294 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.7■□□□□ 0.26
LCMT2O60294 FGFR3P6-201ENST00000457012 610 ntBASIC16.7■□□□□ 0.26
LCMT2O60294 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
LCMT2O60294 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.7■□□□□ 0.26
LCMT2O60294 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.7■□□□□ 0.26
LCMT2O60294 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 RN7SL510P-201ENST00000581311 263 ntBASIC16.7■□□□□ 0.26
LCMT2O60294 NKAPP1-205ENST00000585790 367 ntBASIC16.7■□□□□ 0.26
LCMT2O60294 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.7■□□□□ 0.26
LCMT2O60294 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.7■□□□□ 0.26
LCMT2O60294 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.7■□□□□ 0.26
LCMT2O60294 AL691432.3-201ENST00000621860 400 ntBASIC16.7■□□□□ 0.26
LCMT2O60294 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.7■□□□□ 0.26
LCMT2O60294 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.7■□□□□ 0.26
LCMT2O60294 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
LCMT2O60294 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCMT2O60294 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LCMT2O60294 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.69■□□□□ 0.26
LCMT2O60294 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.69■□□□□ 0.26
LCMT2O60294 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.69■□□□□ 0.26
LCMT2O60294 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.69■□□□□ 0.26
LCMT2O60294 AL020989.1-201ENST00000422979 469 ntBASIC16.69■□□□□ 0.26
LCMT2O60294 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.69■□□□□ 0.26
LCMT2O60294 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LCMT2O60294 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.69■□□□□ 0.26
LCMT2O60294 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.69■□□□□ 0.26
LCMT2O60294 AC073592.4-201ENST00000623827 446 ntBASIC16.69■□□□□ 0.26
LCMT2O60294 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.69■□□□□ 0.26
LCMT2O60294 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 SIGLEC16-201ENST00000599858 1437 ntBASIC16.69■□□□□ 0.26
LCMT2O60294 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.69■□□□□ 0.26
LCMT2O60294 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LCMT2O60294 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LCMT2O60294 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.69■□□□□ 0.26
LCMT2O60294 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
LCMT2O60294 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCMT2O60294 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.68■□□□□ 0.26
LCMT2O60294 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 AC106820.2-201ENST00000563775 3264 ntBASIC16.68■□□□□ 0.26
LCMT2O60294 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LCMT2O60294 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.68■□□□□ 0.26
LCMT2O60294 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms