Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.29□□□□□ -0.12
SSSCA1O60232 AP003041.3-201ENST00000527151 707 ntBASIC14.29□□□□□ -0.12
SSSCA1O60232 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.29□□□□□ -0.12
SSSCA1O60232 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.29□□□□□ -0.12
SSSCA1O60232 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.29□□□□□ -0.12
SSSCA1O60232 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.29□□□□□ -0.12
SSSCA1O60232 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SSSCA1O60232 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
SSSCA1O60232 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.29□□□□□ -0.12
SSSCA1O60232 CD177P1-201ENST00000606252 935 ntBASIC14.29□□□□□ -0.12
SSSCA1O60232 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SSSCA1O60232 TSPY26P-202ENST00000565928 3884 ntBASIC14.29□□□□□ -0.12
SSSCA1O60232 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SSSCA1O60232 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SSSCA1O60232 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.29□□□□□ -0.12
SSSCA1O60232 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.29□□□□□ -0.12
SSSCA1O60232 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SSSCA1O60232 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SSSCA1O60232 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.29□□□□□ -0.12
SSSCA1O60232 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
SSSCA1O60232 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSSCA1O60232 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.28□□□□□ -0.12
SSSCA1O60232 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.28□□□□□ -0.12
SSSCA1O60232 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.28□□□□□ -0.12
SSSCA1O60232 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.28□□□□□ -0.12
SSSCA1O60232 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.28□□□□□ -0.12
SSSCA1O60232 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.28□□□□□ -0.12
SSSCA1O60232 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 AC006058.3-201ENST00000606217 1069 ntBASIC14.28□□□□□ -0.12
SSSCA1O60232 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.28□□□□□ -0.12
SSSCA1O60232 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.28□□□□□ -0.12
SSSCA1O60232 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.28□□□□□ -0.12
SSSCA1O60232 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSSCA1O60232 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SSSCA1O60232 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSSCA1O60232 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.27□□□□□ -0.12
SSSCA1O60232 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SSSCA1O60232 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SSSCA1O60232 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSSCA1O60232 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSSCA1O60232 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSSCA1O60232 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSSCA1O60232 AC116353.5-201ENST00000638148 1699 ntBASIC14.27□□□□□ -0.12
SSSCA1O60232 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSSCA1O60232 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.27□□□□□ -0.12
SSSCA1O60232 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSSCA1O60232 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSSCA1O60232 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms